Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3865g00012 ATGGCTTCCGTAGCAGCTACACAGTTTCTATTACACAACGCTCTCTCACGAAGTCACCGATCGACCAGATTCTTCGGCCTCCAAAGCCCCACTTCTAGGGCTCTGGTTCTTCGAATTCGTGCCTCTCAGACTTCAGAGGGGCCTCGCAGGAGCCAGAAAGCACCCCCTGGAGTTGACACAAGGATCCATTGGGACAACGAAGATGAGGGTTGGCTCGGAGGCTCCACTAGTAATAGTAAACAATCCAAGCCAGAGGATGTGCTGGGCCAAAATTTTGCTGATTTGATTTCTGATTTTTCTGGCTCTCATTACGAATTTTTAGGAGTCTCAGCAGAAGCTGATATAGAAGAGATTAAAGCAGCTTACAGGAGATTATCAAAGGAATACCACCCAGACACAACCTCACTCCCTCTGAAAACTGCCTCAGACAAATTCATGAAGTTGAGAGAAGTTTACAATGTCCTGAGCAATGAAGAGAGGCGGAAATTTTATGACTGGACGCTTCTCCAAGAGGCGGCGAGCCGGCAATCGGAGAAGATGAAGATGAGATTGGAGGATCCTCGTGAGCAAGAGTTGAAGAGCTGGGAATCTGTTCCAGACATGGTTGATAGGCTTGGAGGAAGGAACATGAAGCTCAGTGATCAAGCAGCGACTGCTCTCACTGTTGATGTTTTCATCATTATTTTTGCCATTTGCTGCATCATTTATGTAATATACTTCAAAGAACCATATTACTAG 738 0.4607 MASVAATQFLLHNALSRSHRSTRFFGLQSPTSRALVLRIRASQTSEGPRRSQKAPPGVDTRIHWDNEDEGWLGGSTSNSKQSKPEDVLGQNFADLISDFSGSHYEFLGVSAEADIEEIKAAYRRLSKEYHPDTTSLPLKTASDKFMKLREVYNVLSNEERRKFYDWTLLQEAASRQSEKMKMRLEDPREQELKSWESVPDMVDRLGGRNMKLSDQAATALTVDVFIIIFAICCIIYVIYFKEPYY 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3865g00012 245 ProSitePatterns Nt-dnaJ domain signature. 145 164 IPR018253 -
Pral3865g00012 245 Pfam DnaJ domain 103 165 IPR001623 -
Pral3865g00012 245 ProSiteProfiles dnaJ domain profile. 102 168 IPR001623 -
Pral3865g00012 245 MobiDBLite consensus disorder prediction 42 85 - -
Pral3865g00012 245 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 1 244 IPR044618 -
Pral3865g00012 245 FunFam DnaJ homolog subfamily C member 4 91 189 - -
Pral3865g00012 245 Gene3D DnaJ domain 94 188 IPR036869 -
Pral3865g00012 245 MobiDBLite consensus disorder prediction 71 85 - -
Pral3865g00012 245 SUPERFAMILY Chaperone J-domain 102 169 IPR036869 -
Pral3865g00012 245 PRINTS DnaJ domain signature 104 122 IPR001623 -
Pral3865g00012 245 PRINTS DnaJ domain signature 122 137 IPR001623 -
Pral3865g00012 245 PRINTS DnaJ domain signature 140 160 IPR001623 -
Pral3865g00012 245 SMART dnaj_3 101 160 IPR001623 -
Pral3865g00012 245 CDD DnaJ 103 157 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3865g00012 Pral-Chr3865 49757 51589 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3865g00012 103 165 C2H2 Transcription Factor Family AT1G74250 40.299 3.47e-08 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3865g00012 K23051 - qsa:O6P43_001846 314.694