Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3861g00001 ATGGTTAGGAAGCCATTTGCAATTCGCGATTACCCACCTGGGATAGGACGGAATACAGCAAGAATCCATGTTACTCCTAGAGAAGGTACTGCAAAGGTTGTACTTTTTGAGAAGGATGGTGAAGTTAATCCTCGATACTCTAAGTTCTTGAGTTCAACTCCTATTGAGACAACTGAGAAAATGTTGATGGGTCCTAAATTGTCTCCATATGTGAAAACAGCCAGTTCGAGTGGTTATTCACAGAAGGCTGCAACTAGAAGATTTATTTCAGCCATTAGAGACTATCCTCCATTTTGTGGACCTAATTCTCTGAGTCTGAGTAAGGGCGATGTTTCCAAGGGCAAGCTCATGGACAGGCATTTGAGTGGTGCTACAGAAGAAAAGAAGAGAAAACTTGATTGCCTCACAGGGGGTGATGGGTCTAAAGCTGTGTTGAGGACTAAAGACTCTCTGAATCATTCCAAGATAAAGGTTTTGAAAAAGAAAGAAGGACATGCTGCTCCTGGTGGTATGGCTACACTTGCGGTTTTAGGAAAAAATTGTCTTGATAACAATTATGGTAGAAAATTTTCTGATGGCCATAGATCATATGGTGTAAATGTTCCACTTCTGCATCGTCGTAATTTGAGTATTCGCAACAATGACGCAACTGTGACACGAAATACTGTAAGAGAGACACTGCGCTTGTTTCAAGCTCTTTGTAGGAAATTGTTGCAAAAACTAGAAGCAGAGTCAAAAGGCCAAGCAAAAGTTCGTAAGAGGGTTGATTCAGATGCAGCAAAGATCCTCAGATATGAAGGAAAATATGTGAATGCAGGCAAGCAGATCTTTGGTCCTGTCCCTGGGGTTGAAGTAGGTGACGAATTTGATTATAGGGTGGAGCTTAATATTGTTGGTCTCCATCGCCAAACACAAGCTGGCATAGATTTTGCGAAGATCAATGGTGAGCACCTTGCAACTAGTATTGTTGCATCTGGGGGATACCATGACGAGTTGGATAACTCAGGTGTTTTGATTTATTCAGGGCAAGGAGGGAATGTGATGTGCAGTAAGAAACAACCTGAAGACCAGAAGCTTGAGAGGGGTAATCTTGCTTTGAAGAACAGTAGCAAGAAAAAGAACCCTGTTAGAGTGATACGTGGTGCTTTCTTTGAAGACGGAAATCGTAGGAGATTTGTGTATGATGGATTGTATGAAGTTGAGGCATATTGGCAAGAAATGGGGCCACATGGCAAGATGGTTTTCAAGTTTCAGCTGCGAAGAATCCCAAATCAACCAGAGCTTCCTTGGATTGAACTGAAGAAATCCAACATGTTCACATTAAAGAAAGGCCAGTGTGCTGTTGACATCTCACATGGTAAAGAGGAATTACCAATTCGTGCTGTGAATACCATAGATAATGAAAAACCTCCATCATTTGAATATATTACTAGGATGATCTATCCTAATTGGTTGCATCTGACACCTGCTAAGGGATGTAACTGTACAGACAGATGCTCTGACCCGACAAGATGTTCTTGTGCTGTTAAAAATGGAGGAATCCCATTCAATCACACAGGGTGTATTGTAGAAGTAAAGCCTCTGGTGTATGAGTGTGGCCCTTCTTGCAAATGCCCTCCAGATTGCTATAACAGAGTCAGCCAACGTGGAATAAAATTCCCGCTTGAAGTTTATAAAACTGACAAAAGGGGATGGGGTGTGAGATCTCTACGCTCCATTCCTTCTGGCAGTTTTGTATGCGAATACATAGGAGAGTTACTTGAAGACAAGGTAGCTGAACAAAGAACTGGTCATGATGAGTATCTCTTTGATATAGTCTCTGAGGATGGCAGTGGCTTCACCATTGATGCAGCTCGGTGTGGTAATCTGGGCAGATTTTTCAACCATAGTTGCGCCCCTAATATGTATGCACAAAATGTTCTTTTTGATCATGGCGACTGCAGGATTCCTCACATAATGCTGTTTGCTGCTGAGAACATTCCTCCATTAAAAGAGCTGACTTATGATTACAATTACTCAAAAGATCAAATCTTCGATTCGGATGGCAACATAAAGAAGAAGGATTGCTTTTGTGGCTCCTTGGGTTGTACTGGAAGGATGTATTGA 2106 0.4179 MVRKPFAIRDYPPGIGRNTARIHVTPREGTAKVVLFEKDGEVNPRYSKFLSSTPIETTEKMLMGPKLSPYVKTASSSGYSQKAATRRFISAIRDYPPFCGPNSLSLSKGDVSKGKLMDRHLSGATEEKKRKLDCLTGGDGSKAVLRTKDSLNHSKIKVLKKKEGHAAPGGMATLAVLGKNCLDNNYGRKFSDGHRSYGVNVPLLHRRNLSIRNNDATVTRNTVRETLRLFQALCRKLLQKLEAESKGQAKVRKRVDSDAAKILRYEGKYVNAGKQIFGPVPGVEVGDEFDYRVELNIVGLHRQTQAGIDFAKINGEHLATSIVASGGYHDELDNSGVLIYSGQGGNVMCSKKQPEDQKLERGNLALKNSSKKKNPVRVIRGAFFEDGNRRRFVYDGLYEVEAYWQEMGPHGKMVFKFQLRRIPNQPELPWIELKKSNMFTLKKGQCAVDISHGKEELPIRAVNTIDNEKPPSFEYITRMIYPNWLHLTPAKGCNCTDRCSDPTRCSCAVKNGGIPFNHTGCIVEVKPLVYECGPSCKCPPDCYNRVSQRGIKFPLEVYKTDKRGWGVRSLRSIPSGSFVCEYIGELLEDKVAEQRTGHDEYLFDIVSEDGSGFTIDAARCGNLGRFFNHSCAPNMYAQNVLFDHGDCRIPHIMLFAAENIPPLKELTYDYNYSKDQIFDSDGNIKKKDCFCGSLGCTGRMY 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3861g00001 701 Pfam SAD/SRA domain 277 425 IPR003105 -
Pral3861g00001 701 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 142 701 IPR025794 GO:0016571
Pral3861g00001 701 SMART preset_2 447 537 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral3861g00001 701 Pfam SET domain 564 671 IPR001214 GO:0005515
Pral3861g00001 701 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 163 693 - -
Pral3861g00001 701 ProSiteProfiles Post-SET domain profile. 685 701 IPR003616 -
Pral3861g00001 701 SUPERFAMILY SET domain 436 678 IPR046341 -
Pral3861g00001 701 ProSiteProfiles SET domain profile. 553 671 IPR001214 GO:0005515
Pral3861g00001 701 Gene3D - 252 442 IPR036987 -
Pral3861g00001 701 ProSiteProfiles Pre-SET domain profile. 491 550 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral3861g00001 701 SMART set_7 553 677 IPR001214 GO:0005515
Pral3861g00001 701 Gene3D SET domain 443 701 IPR046341 -
Pral3861g00001 701 ProSiteProfiles YDG domain profile. 278 421 IPR003105 -
Pral3861g00001 701 SUPERFAMILY PUA domain-like 264 434 IPR015947 -
Pral3861g00001 701 SMART G9a_1 273 425 IPR003105 -
Pral3861g00001 701 Pfam Pre-SET motif 450 545 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3861g00001 Pral-Chr3861 9181 11340 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3861g00001 274 701 EF-hand Containing Proteins AT5G13960 40.041 2.86e-105 328
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral3861g00001 SAD_SRA 3.8e-50 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3861g00001 K11420 - qsa:O6P43_024410 712.605