Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3860g00004 ATGTTTCTGCATAGAAACTCCACAGCTGTGTTGGTGATTCCTATTATTGCTGTTTCGGCATATTTTATTGTCGTACATGAGACTAATCAAAACGAGCAGTCGTTTCTGGGTGATTTATGGTCGTCTTTCTCTTTAAATCGTGGTCGTCACCACCACCACCACCACCATCATTCCCACAAGAAACGACCTGATAATAGCAGCAGCGGTGAGATAACTGGCAATATATGTGATGATTTTCCGCCGGGAATTCCGCCGCCGAATACCAATACCACGACGTATCTGTGTGTGGATCGACGAGGGTGCTGCAACTTCACCACCGTGCAAGCAGCTGTAAATGCTGTCCCAGATTTCAGCGATAAAAGAAACGTCATATGGATTAATAGTGGCCTTTATTATGAGAAAGTGATGGTGCCAAGAAGCAAACCAAACATCACATTTGAAGGACAAGGCTACACTTCAACAGCAATTGCATGGAACGACACAGCCAAGTCAGCAAACGGCACATTCTATAGTGGCTCCGTCCAAGTCTTCGCCTCCAACTTCATTGCCAAAAACATAAGCTTCATGAACGTGGCGCCAATTCCAGGTCCTGGGGTGGAAGGAGCACAAGCAGTGGCAATAAGAGTAGGGGGTGATCAGGCTCAGTTCTGGGGATGTGGGTTTTTTGGAGCACAAGATACTCTTCATGATGATAGGGGTCGCCATTACTTTGGGGATTGCTATATCCAGGGCTCCATTGATTTCATCTTCGGCAATGCAAGGTCTCTCTATGAGAATTGTCAACTAGTGTCAATTGCGAACCCGGTACCCCCGGGTCAAAAGTTCATAAACGGCGCCGTTACAGCTCAGGGGAGGTCATCAAACGACGAAAACACGGGCTTCGCTTTTGTGAACTGTAGCATAGGAGGCTACGGAAGGATATGGCTAGGTCGGGCATGGCGTCCTTACTCTCGTGTCGTTTTTGCCTTTACGACAATGTCTGATATCATTGCCCCTGAAGGTTGGAACGACTTCAATGACCCTTCCAGAGATCAGACAATATTCTATGGAGAATACAAGTGCACAGGGCCAGGGGCTGATCTGAATATGAGGGCGCCTTATGTACAGAGATTAAATGATACTATTGCTTCTACTTTCATTAACACATCATTTATTGATGGAGACCAATGGTTGTTTCCTCCCAAATAA 1188 0.4621 MFLHRNSTAVLVIPIIAVSAYFIVVHETNQNEQSFLGDLWSSFSLNRGRHHHHHHHHSHKKRPDNSSSGEITGNICDDFPPGIPPPNTNTTTYLCVDRRGCCNFTTVQAAVNAVPDFSDKRNVIWINSGLYYEKVMVPRSKPNITFEGQGYTSTAIAWNDTAKSANGTFYSGSVQVFASNFIAKNISFMNVAPIPGPGVEGAQAVAIRVGGDQAQFWGCGFFGAQDTLHDDRGRHYFGDCYIQGSIDFIFGNARSLYENCQLVSIANPVPPGQKFINGAVTAQGRSSNDENTGFAFVNCSIGGYGRIWLGRAWRPYSRVVFAFTTMSDIIAPEGWNDFNDPSRDQTIFYGEYKCTGPGADLNMRAPYVQRLNDTIASTFINTSFIDGDQWLFPPK 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3860g00004 395 MobiDBLite consensus disorder prediction 51 82 - -
Pral3860g00004 395 ProSitePatterns Pectinesterase signature 2. 242 251 IPR033131 -
Pral3860g00004 395 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 82 391 - -
Pral3860g00004 395 FunFam Pectinesterase 88 395 - -
Pral3860g00004 395 Pfam Pectinesterase 96 388 IPR000070 GO:0030599|GO:0042545
Pral3860g00004 395 Gene3D - 87 393 IPR012334 -
Pral3860g00004 395 SUPERFAMILY Pectin lyase-like 92 392 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3860g00004 Pral-Chr3860 36835 40427 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3860g00004 56 391 Carbohydrate Esterase AT1G05310 71.726 0.0 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3860g00004 - - gmx:100806629 581.252