Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3852g00016 ATGGCCAACTCCAGGCGGCTTAGGGCATTCAAGCGATGGATGGCATCCCGGGGTTTCGAAATCAGCGATGGCCTGGAGTTCGTAGACGATCCCGGAAATGGAATTGCGGTGAGAGCATTGTGCCAGTTGAAGGAAGGCGATGTTGTTGCCAGAATACCGAAGGATGCTTGCCTGACGATTAAGACTAGTGGGGCGAGTCAAATGATTGAAGACTATGGTTTGGCTGGTAATCTGGGACTAGCAGTGGCTCTAATGTATGAGAGAAGCTTGGGCGAGAAGTCACCCTGGGCTGGCTACCTTCAGGTTTTGCCTCACCAAGAGTGCCTGCCGTTAGTGTGGACTCTGAACGAAGTGAACGAGCTTTTGAGTGGGACTGAGCTACACAAGACGGTGCAAGAGGACAAAGCTCTTATGTATGAGGACTGGAAAGAGAATATTCTGCCCGTCTTGGATTTTTCACCTTCAAAGCTTAACCTAAAATATTTCGGTGTAGAAGAATATTTTGCTGCAAGAAGTCTTATTGCTTCACGAGCTTTTGAGATAGATGATTACCATGGCTTTGGCATGGTTCCCTTGGCTGACCTATTCAATCATAAAACAGATGCTGAGGATGTGCATTTCACTGCTGTATCATCAAACTATGATGATGATGATGATGGAAATGAGTGTGTCACTGATGAAGAAGAATTGGCTGAAAATTCTTCAATGGATGAGACTGAGTTGGATACTGCTCTTATTGGGAAATACAGTGATGGCAACTTGGAGTCATCCTCAGTTGTGGGAGATGATTCTTCAATGTTGGAGATGATTATGATAAAAGATGTCAGCGTTGGAGCTGAGATATTTAACACATACGGTTCAATGGGCAATGCTGCTTTGCTTCATAGATATGGATTTACTGAGCAAGATAACTCCTATGATATTGTGAACATTGATTTGGAGCTGGTTCTTCAGTGGTGTTCTTCTTTGTTTTCATCTCGATACTCTCGAGCTAGAGTCTCTCTTTGGAGAAGGCTGGGCTATTCTGCATGTGTCAGCCAAAACTTGGAATATTTTGAGATATCATCTGATGGAGAACCACAGACTGAACTCCTGATTTTATTATACATTATGTTATTATCAGAAGATGCGTACCATAAGTTAGACTTATCGGTGTCAGTTGCAGGGAATGTTCATGAATCGAGTGAAACTTATCTTTCAGGAGATTGCAATATCTTGACAAAGAAAGCATCTGATATGAGTAAGGAATCCTTGCGGACTAGAAAAGTTTGTGATGCTTTGTTCTCTGTTGCTGATATGCGTGAAAGTCTTTATGGTAACTCAATAGAAGATGATATTGAGACATTAGGCAGGTGTAACTGTGTTAGGGAAAGAAAGCTGTTTCATTCTTTGGTGCTGCGCATCAGTGAAAGGAAGATCCTTGAAAAGCTCAGAAATTACGCTGCCCAGCCAATTAGAATTGGTAAGCGAAATTCTGCAAGGAAAAAAATGAAAAGCAGAAAAAAGTAAAAACAATCCGGTGAAAAGGTAGAACTAGACAATTGGCCAGTGGAGAAACTCGAAAGGCAGAGGCAATTCGTGAAGCCGGTGAAAGGCAGAAAGCAAAGCAAGGCGAGCAGCAATGGATCTGGGGCAGGGAGACCGGTCGAACACTGGAATGAACTCAACAAAGAAGGGAATGGGAATCTTGGTCAAGGGAGAACGGTCAAACACTCGAACTCAACGAAACACTTAACTCAACAGCGCTGCAAGGGAGAGCGGTCGAACACTCGACGGCGTTGCAAGGGAGAACTCGAACACTCGACGGCGCTGCAACTGCAAGGGAGAACTCGAACACTTGACGACGCTACAACTGCAAGGGAGAATGGTCGAACACTCGATGGCGCACTTGAACTCAACGTCTCAACGAAACGAAGATGGGAATGGGGGAATCTGGTCTGCGGTCTGGCCAGGATGAGGGAGGGACCGCGTGAATTGACCGAACCCAACCATCAAACGACGTCGTTTTGGGTTTAG 2016 0.4489 MANSRRLRAFKRWMASRGFEISDGLEFVDDPGNGIAVRALCQLKEGDVVARIPKDACLTIKTSGASQMIEDYGLAGNLGLAVALMYERSLGEKSPWAGYLQVLPHQECLPLVWTLNEVNELLSGTELHKTVQEDKALMYEDWKENILPVLDFSPSKLNLKYFGVEEYFAARSLIASRAFEIDDYHGFGMVPLADLFNHKTDAEDVHFTAVSSNYDDDDDGNECVTDEEELAENSSMDETELDTALIGKYSDGNLESSSVVGDDSSMLEMIMIKDVSVGAEIFNTYGSMGNAALLHRYGFTEQDNSYDIVNIDLELVLQWCSSLFSSRYSRARVSLWRRLGYSACVSQNLEYFEISSDGEPQTELLILLYIMLLSEDAYHKLDLSVSVAGNVHESSETYLSGDCNILTKKASDMSKESLRTRKVCDALFSVADMRESLYGNSIEDDIETLGRCNCVRERKLFHSLVLRISERKILEKLRNYAAQPIRIGKRNSARKKMKSRKKXKQSGEKVELDNWPVEKLERQRQFVKPVKGRKQSKASSNGSGAGRPVEHWNELNKEGNGNLGQGRTVKHSNSTKHLTQQRCKGERSNTRRRCKGELEHSTALQLQGRTRTLDDATTARENGRTLDGALELNVSTKRRWEWGNLVCGLARMREGPRELTEPNHQTTSFWV 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3852g00016 671 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 5 450 - -
Pral3852g00016 671 MobiDBLite consensus disorder prediction 580 599 - -
Pral3852g00016 671 SUPERFAMILY SET domain 4 305 IPR046341 -
Pral3852g00016 671 MobiDBLite consensus disorder prediction 523 600 - -
Pral3852g00016 671 Gene3D set domain protein methyltransferase, domain 1 3 299 - -
Pral3852g00016 671 ProSiteProfiles SET domain profile. 23 286 IPR001214 GO:0005515
Pral3852g00016 671 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 296 486 IPR036464 -
Pral3852g00016 671 MobiDBLite consensus disorder prediction 558 579 - -
Pral3852g00016 671 Gene3D - 302 491 IPR036464 -
Pral3852g00016 671 MobiDBLite consensus disorder prediction 491 511 - -
Pral3852g00016 671 CDD SET_LSMT 24 300 - -
Pral3852g00016 671 Pfam SET domain 34 286 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3852g00016 Pral-Chr3852 99498 109454 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3852g00016 1 497 NAC Transcription Factor Family AT3G56570 56.792 0.0 547
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral3852g00016 SET 6e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3852g00016 - K05302 vra:106769924 694.115