Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3851g00006 ATGGCTCAGTTGCGAGCTGAATCATCTTCTTGTGTCACTTATAGATGGACTTATGATGTGTTCCTTAGCTTTCGAGGCGAGGATACTCGCTTGAATTTCGTCAGCCATCTCTACGACTCTCTGCATCGAAGTGGAATCCATGCCTTCATCGATGATGAATCCCTGCAGGCTGGGGAAGAGATCAAAGCGTCTCTTTTGAAAGCCATACGAGAATCCAGAATATCGATAATAGTTTTTTCTGAGAACTACGCTTCATCAACGTTCTGTTTGGATGAACTTGCTGAGATTGTAGAGTGCTTCAAAGGAGAAGGTCGATTGGTGTATCCGGTGTTCTATTACGTGGATCCTTCAGAGGTGAGATATCAGAGAGGTAGCTATGGAGAATCATTGCTTTATCTGCAGAAAAGATTGGAGACGGAGGAGTATAAGCTACAAAAGTGGAGGTTGGCTTTGTCTCAAGCAGCTAATTTGTCCGGATGGCATCTCAAGCCTGGGATGGCAAAAGAGCAAGAATATATAAGAAGGATCACTTGTGAAGTCTCTACAAAGATCAACCGCACACCATTACATGTCACCAATTATCCAGTTGGACTTGTGCCTCGGGTCCAACAAGTGATGTCACTTCTAGATCTTTGGTCCAATAAAGAAGTCAACATGGTTGGAATTTGTGGCATTGGTGGATTAGGTAAATCAACAATTGCAAGGGCTGTGTATAACTCAATCGCTGATCATTTTGATGGTTTATGTTTTCTTTCTAATGTTAGAGAAACCTCTAACAAGCATGGCTTGTCGTATCTTCAAGAGATATTGCTTTGCAAATTAGTCATGGAGAAAGATCTTAAATTGGGAGATTCCTATGAAGGAATTTCTGTTATAGCACATAGGCTTCGTGGAAGGAAGATCCTTTTGGTTATTGATGATGTTGACAAATTAGAGCAATTACAGGCTCTAGCTGGAAGATGTGATTGGTTTGGTTCTGGAAGTAGAATCATAATTACAACTAGAAATAAGCATTTGTTAGCATGTCATGGGATTAAAAGAATTTATGACGTCAAGGAATTAAATGATGAAGAAGCTCTTCAAGTGTTGAGTTGGAATGCCCTAAAAAAGGAAAATGCAGATTCTAGTTACCTTGATATTTCAAATCATGTAATACTTTATTCATGTGGCCTTCCATTGGCCTTGGAAGTAATTGGCTCCAATTTATGTGGCAAAAGGATTGATGAATGGGAATTTGCATTTGATAAATACCGAAGAATACCAAACAAACAAGTTTTTGAAGTCTTGAAATTAAGCTTTGACGCTTTAGAGGATAGAGAGAAGGAGATGTTCCTTGACTTGGCATGCTTTTTCAAAGGTGAAAAATTAGATGTCATAAAAACATTGCTTAGTTTCCGAGGAGTTCATCCTGAGTATATTATTGGAGCACTTATGGATAAATCCCTTGTGAAGATTGAAGAAAATTGTGTGACTATGCATGACATGATAGAAGAGATGGGCAAAGAAATTGTTAGGCAAAAGTCACCAAAAGAGCCCGGAAAACGAGATAGATTGTGGTTCTATGATGACATTCTCCATGTTTTACAAGAAAACACTGGATCAGATGAGATTGAAGCTATAATTCTAGACTTACCTGAAGATAAAGAAGTTCAATGGAGTGGAAAGGCATTTAAGCACATGAAAAACCTCAAAATGCTTGTGATTAAAAATGCAAGCTTTTCTAGAAGTCCTGAATGCCTCCCAAACACCTTAAGTGTATTGGAATGGAAGGGGTATCCTTCTAAATGTTTGCCATCTAATTTTCATCCAATAAGGCTCATCCGTCTTGACTTGTCCAATAGTTCTATTGAATTACTCCAACCACTTAATAAGAAATTTGAGAGTCTAAGTTGCTTGAATTTTAGACATTGCAAGTTGTTAAGACAAATACCAAATTTGTCAGGAGTTTCCAATTTGATGGAATTGTGGCTCGATAATTGTACAAACTTAACTGAAATCCACGATTCAGTTGGATTTTTGGATAAGCTTAGAGAATTTAGTGCCATGCGATGCAAAAACTTGAGGATCTTACCAACTGGTATTAATTTGGCATCTCTTGAACATCTCAACCTTTATGGGTGTTTAAGTCTTCGAAGATTCCCAGAAATATTAGATGAAATGAGGAAAATAAGAACAATTGATTTGGATAAAACAGCCATAGAAGAATTGCCATCTTCTATTTGCAATCTGATTGGGCTTGAAAGCTTAAACATGGATGAGTGTCATAACCTTAAACAGCTGCCAGTTGTCATTTGTATGATGCCACACCTGTGGAAAATAACAGCAAACTTTTGTGAAGAGTTGAGACATTTTAAGATGCGTGAAAGTGAAAGAGAAGTACGCTTACAATGCTCAGCCATGTCTATGAAATTGGAACATGTTTGCTTCTCAAATTGCAATTTATCAAATGGTTCTCTTGACTTTTGTCTCTCTTACTTCCCCAATTTGATACAGTTAGATCTAAGTTATAATAACTTCACAACCCTTCCTGCATCCATCAAAGAATGTCACTGTTTGAAATATCTTTCCTTGGATAATTGCAATATGCTTCAACATATTGAAGGGATGCCGCAAAAGCTAGAAAAATTCAGTGCCTTGCATTGCACATTGTTGAGTGAGCCGTCAAGAAGCATGTTATTGAATCAGGAAATTCACCAATATCCAGGGAAAAGAAACTTCATTTTGCCAGGAAAAAATATCCCAGAATGGCTTGACAAATATAGTTGTGGAGATTCACTGTCTTTTTGGGTTCGTAATGAGTTGCCAAATATTTATATGTGGATCCTTGTAAAAGACGACCAAGTTTCTCTGTGTGACTGTAAATTCTCTGTACGAGTCAATGACATTGTACAAGAAATTTCTTCCGGATGGTTTTCACTTTCAACAATGAAGAGATATCACATATATCTTAGCGACTTGCAAAGTATAGTTCGAAAGCTTCAACTCTCCCTCATGGATAAATGGAATCATGTCAACATTTCCATTGAGAACAGAACACAAGAAGTAAGAAGCAAAAGGGAAGTTTATTTTGCAGTTCACGTGTACAAGCAAGGAAATAATGTTGAGAACATCGAGTTCATGAACCCTAAAGCGTGCATCAATTATTATCCATGGAAGCTAATTCAGCAACCAGAAGATTTGGAACAATTGAAAGATGATGTGAATCAAGACTCAAAATCAACTAATTATGCAGAATTAGCTCATAACAGCACAACTTATCAAGATATTAGCCCAAACTTTTGCGGCATCTCCAAATTAAGTGAGAGGAAGGACGGGCGAGATAGCTTGATCCGAAGTAAGCATAATGCCATCCTAAGGAAAATTAGGAGATGGAAGGAAGATCACTCCATGATTTTGAAGTTAAAAGATCTAACTAATATGGTTGTGGCGGCTAACCAATTGATTGAATCGTTGGAGAATATACTACATTTGAACATAGAAGAGCAAGGGTACAGTTTTGTGCTGATGGATCTCAAAATTCTAGCAGATAAGGCACGACTTAAGGATGAGTTCAAGCAATTCCTAGCTCAAAATAGGCATCCTTTTGATCATAAATCTACCCCCTTCCAGTCCAGTGAATTAAAGGACACCACTGGTGAAGGTAGTTTCAGCAAAGCATCAGAAAAGCACATTTTGGATTTAGTCCGTCCAGAACTGCTCCAACATATTAAATGTATTGCAAGCTTAATGTTTGTGTTAGACTATAGCCAAGAATGTTACAATGCCTACACAAATGTTCGAAGACACGCCTTAAATGAGTGTCTCCTTCATCTTGAAAGGGAAAGATTAAGCATTGAAAATGTTTCAAAAAGGGAATGGGATAGTTTGAACTCCAAAATCAAAGGATGGATTTATCAAGTGAAAATATTTGTCAGGTTGTATATTACAAGTGAGAAGTGGCTTAGTGAGCAGATTTTTGGAGACAATGAGGCCAGTTTGATTTGTTTTGTTGGTGCATCAAAGGCTTTAATATTTTGGTTTTTAGAATTTTGTGAAGCTATATCTGTTGGCCCTCACAATCCTGAGAGAATATTTCGTTTTCTTGACATGTACCAAGTTTTGGCAGATCTTATACCAGACCTAGATGCCTTGTATTCAGGTGAGGTTGGTTCTTCAGTTAGAATCAAGTGTGAAGTGGTTCTAAACAGATTGGGCGCTTGTGTGGGGTCAATATTTCTTGAATTTAAAAATGTTATTGCATCAAATCCATCTCAATCTCCTTTCCCAGGTGGTGGGATTCATCCCTTAACCTATTATGTCATGAGCTATATTAGTTATCTCTTGGACTACAATAACACTCTTAATATACTGAATGGTGAAGAGGAATTAGAGTATGATATTTCACTGTACCACTCAATGAGCCATGACACATCACAAGATAGTGACATCCTGGGATCTTCCTATAGTAGTGTTTCCTCAGTCACAGTCCATTTTCGATCAGTCACTTCAATCTTGGAATTGAAGCTTGAGAACAAGTCCAAGTTATATAAGGAAGCTGCTTGCCAACACCTATTCTTAATGAACAATATGCATTATATGGCTCAAAGGGTTCAAGAATCTCAATTGAAGCATATTTTTGGAGATGAATGGATACGAAAGCACGTCTACAAGTACCAACAACATGCATGGAACTACGAGCAAGCTAGTTGGAGCTCGGTTCTCTCTTTGCTTAAGGATGAGAGAATTCAATTATCTATGTCGCGCAATCTTCTCAAGACAAGATTGCAGAACTTCTACGTTGCCTTTAAAGATATTTACAGGATCCAAACTGCTTGGGTGATCCCAGATCATTTACTGCGCGAGGGCATGCAAATCTCTATATCCCAAAAGCTAGTTCATGCTTATCAGGCATTCTTAAGGAAGTATTATAATTACATAGGTGACAAGCACATTAAATATAATGTTTGTGATATTGAAACTTCCATTTTGGGTTTCTTTGGGGGATCCCATAAGTCGTGGCCACATTCCAAAAGTTTTGCCTGCTGA 5025 0.3775 MAQLRAESSSCVTYRWTYDVFLSFRGEDTRLNFVSHLYDSLHRSGIHAFIDDESLQAGEEIKASLLKAIRESRISIIVFSENYASSTFCLDELAEIVECFKGEGRLVYPVFYYVDPSEVRYQRGSYGESLLYLQKRLETEEYKLQKWRLALSQAANLSGWHLKPGMAKEQEYIRRITCEVSTKINRTPLHVTNYPVGLVPRVQQVMSLLDLWSNKEVNMVGICGIGGLGKSTIARAVYNSIADHFDGLCFLSNVRETSNKHGLSYLQEILLCKLVMEKDLKLGDSYEGISVIAHRLRGRKILLVIDDVDKLEQLQALAGRCDWFGSGSRIIITTRNKHLLACHGIKRIYDVKELNDEEALQVLSWNALKKENADSSYLDISNHVILYSCGLPLALEVIGSNLCGKRIDEWEFAFDKYRRIPNKQVFEVLKLSFDALEDREKEMFLDLACFFKGEKLDVIKTLLSFRGVHPEYIIGALMDKSLVKIEENCVTMHDMIEEMGKEIVRQKSPKEPGKRDRLWFYDDILHVLQENTGSDEIEAIILDLPEDKEVQWSGKAFKHMKNLKMLVIKNASFSRSPECLPNTLSVLEWKGYPSKCLPSNFHPIRLIRLDLSNSSIELLQPLNKKFESLSCLNFRHCKLLRQIPNLSGVSNLMELWLDNCTNLTEIHDSVGFLDKLREFSAMRCKNLRILPTGINLASLEHLNLYGCLSLRRFPEILDEMRKIRTIDLDKTAIEELPSSICNLIGLESLNMDECHNLKQLPVVICMMPHLWKITANFCEELRHFKMRESEREVRLQCSAMSMKLEHVCFSNCNLSNGSLDFCLSYFPNLIQLDLSYNNFTTLPASIKECHCLKYLSLDNCNMLQHIEGMPQKLEKFSALHCTLLSEPSRSMLLNQEIHQYPGKRNFILPGKNIPEWLDKYSCGDSLSFWVRNELPNIYMWILVKDDQVSLCDCKFSVRVNDIVQEISSGWFSLSTMKRYHIYLSDLQSIVRKLQLSLMDKWNHVNISIENRTQEVRSKREVYFAVHVYKQGNNVENIEFMNPKACINYYPWKLIQQPEDLEQLKDDVNQDSKSTNYAELAHNSTTYQDISPNFCGISKLSERKDGRDSLIRSKHNAILRKIRRWKEDHSMILKLKDLTNMVVAANQLIESLENILHLNIEEQGYSFVLMDLKILADKARLKDEFKQFLAQNRHPFDHKSTPFQSSELKDTTGEGSFSKASEKHILDLVRPELLQHIKCIASLMFVLDYSQECYNAYTNVRRHALNECLLHLERERLSIENVSKREWDSLNSKIKGWIYQVKIFVRLYITSEKWLSEQIFGDNEASLICFVGASKALIFWFLEFCEAISVGPHNPERIFRFLDMYQVLADLIPDLDALYSGEVGSSVRIKCEVVLNRLGACVGSIFLEFKNVIASNPSQSPFPGGGIHPLTYYVMSYISYLLDYNNTLNILNGEEELEYDISLYHSMSHDTSQDSDILGSSYSSVSSVTVHFRSVTSILELKLENKSKLYKEAACQHLFLMNNMHYMAQRVQESQLKHIFGDEWIRKHVYKYQQHAWNYEQASWSSVLSLLKDERIQLSMSRNLLKTRLQNFYVAFKDIYRIQTAWVIPDHLLREGMQISISQKLVHAYQAFLRKYYNYIGDKHIKYNVCDIETSILGFFGGSHKSWPHSKSFAC 1674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3851g00006 1674 Gene3D - 14 184 IPR035897 -
Pral3851g00006 1674 Gene3D - 185 346 IPR027417 -
Pral3851g00006 1674 Pfam TIR domain 18 186 IPR000157 GO:0007165
Pral3851g00006 1674 MobiDBLite consensus disorder prediction 1195 1214 - -
Pral3851g00006 1674 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 447 IPR027417 -
Pral3851g00006 1674 SUPERFAMILY "Winged helix" DNA-binding domain 424 529 IPR036390 -
Pral3851g00006 1674 Pfam Exo70 exocyst complex subunit 1296 1655 IPR046364 GO:0000145|GO:0005546|GO:0006887
Pral3851g00006 1674 SUPERFAMILY L domain-like 542 891 - -
Pral3851g00006 1674 Gene3D Ribonuclease Inhibitor 528 712 IPR032675 -
Pral3851g00006 1674 SUPERFAMILY Toll/Interleukin receptor TIR domain 8 160 IPR035897 -
Pral3851g00006 1674 Coils Coil 1134 1154 - -
Pral3851g00006 1674 SMART till_3 17 157 IPR000157 GO:0007165
Pral3851g00006 1674 Gene3D Ribonuclease Inhibitor 713 922 IPR032675 -
Pral3851g00006 1674 MobiDBLite consensus disorder prediction 1196 1214 - -
Pral3851g00006 1674 SUPERFAMILY Cullin repeat-like 1136 1659 IPR016159 -
Pral3851g00006 1674 ProSiteProfiles Leucine-rich repeat profile. 828 849 IPR001611 GO:0005515
Pral3851g00006 1674 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 18 761 IPR044974 GO:0006952
Pral3851g00006 1674 Gene3D Exocyst complex component Exo70 1133 1668 - -
Pral3851g00006 1674 PRINTS Disease resistance protein signature 295 309 - -
Pral3851g00006 1674 PRINTS Disease resistance protein signature 694 710 - -
Pral3851g00006 1674 PRINTS Disease resistance protein signature 219 234 - -
Pral3851g00006 1674 PRINTS Disease resistance protein signature 388 402 - -
Pral3851g00006 1674 FunFam Disease resistance protein (TIR-NBS-LRR class) 14 186 - -
Pral3851g00006 1674 Gene3D - 353 437 IPR042197 -
Pral3851g00006 1674 ProSiteProfiles TIR domain profile. 16 184 IPR000157 GO:0007165
Pral3851g00006 1674 Pfam NB-ARC domain 204 418 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3851g00006 Pral-Chr3851 76952 84669 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3851g00006 1115 1669 EXO70 exocyst subunit family AT3G29400 39.698 4.52e-122 397
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3851g00006 - - pcin:129295352 1348.18