Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3851g00001 ATGGCTCAACCAGCAGTGTCCTCTTGTATTGATTACAAATGGAAGTATGACGTGTTTCCTAGTTTTCATGGTGAAGACACTCGGTTAAGTTTCGTTAGCTTTCTTCGCGGATCTCTACATGAAAGAGGAATCCGTGTCTTTATGGATGATGAGCACATCAGAACGGGAGAAGAAATAACACCAGCACTTATCAAAGCCATAAGAGAATCCAGGATAGCTATCATAGTTTTCTCCGAGAACTATGCCAACTCAACATTCTGCCTGCAGGAACTTGTAGAGATTCTCGAGTGCTTTAAAGAAGAAGGTCGGTTAATATATCCAGTATTTTACTATGTGGATCCATCAGAGTTGCGACGTCCGAGAGCAAGCTATGCAGAGGCTTTGGCTCGATTGGAGAAAAGATTTAAGGACAACAAACAACAAGTAGAAAATTGGAGGTTGGCTTTGTCCCAAGCAGCTAATTTGAAAGGGTGTCATCTCAAAGCCAAGATTGCAAATGAGCAAGAACATATTACAGAGATCACCAATGAAGTATCAGCGAGGATTCATCGTATTCATAATCATTTACACGTTACTCGATACCCTGTTGGACTTGTGTCTCGAGTGAAAAAAGTGGTCTCACATTTAGATCTTTGCTCTACTAAGAAAAATAAAATGGTTGGAATTGTAGGACTTGGTGGGATAGGTAAATCAACGATTGCAAGAGTCTTATATAATTTGATTTCTGATCATTTTGAAGGCCTATGTTTTCTTTTTGATGTGAGGAAAAACTCTAAAATGCCAAATGGTTTGGCACGTCTTCAAGAGACATTGCTTTGTAAATTAGTCAAGGAGAAGGATCTCAAATTGGGTGATTGGTATGAAGGAATACCAATAATAAAACATAGGCTTGGCCACAAGAAAATTCTTTTGGTCATTGATGACGTTGATGAATTGAAACAATTAGAAGCACTAGCTGGAAATTGTGATTGGTTTGGTCCTGGAAGTAGAATTGTCATAACGACTAGGGATAAACAGTTGCTAGTAAGTCATCATGTGAAGAGTATTTATAATGTTGAGGAATTAAATGATGAGGAATCTCTTCAATTGCTTTGTTGGTGTGCCTTTGAAAAGGAGAATGTGGAGTTTGACTTCATGGAGGTTTCTAAACGTGCAATACGTTATTGTTGTGGACTTCCATTAGTTTTAGAAGTGACTGGTTCTTACTTATGTGGTAGAGGAGTCAATGAATGGCACTCTGCATTGGATCAATTCAAAAGAATTCCAGAAGGAAAAGTTTTGGAAGTCCTTCGATTAAGCTATGATGCTTTAGGAGAATTTGAGAAAGAAATTTTTCTACACTTGGCTTGTTTTTCCAAAGGTGAGGAATTAGGAGAAGTTAAGGGCATGTTGTTATGTTTATATGGAATCCCACTGGATAATGTTATTAATGTTCTAGTCAATAAATCCCTCATAAGAATTGAAGGAGATCAGGTGTTAATGCATGACGTGATTGAAGATATGGGTAAAGAAATTGTTCGACAAGAATCACCAGATGAACCCGGTAAACGAAGTAGGTTATGGTTCTACCAAGATATTCTTCATGTTTTAAATCGAAACACAGGAACCAATAAAGTGGGAGTCATATTTCTAGACCTACCTGAAGACTTTTCTGAAGATAATGAAGTACAAATGCAATGGAGTGGAAAGGCATTCATGAAGATGACAAATCTCAAAATCCTTGTGATAAAAAATGCAAGCTTTATTTCAAAATGCCCCACACATCTTCCAAAGAGTTTAAAGTGGTTGAAATGGAAGGGGTATCCTTTCAAGTTTTTGCCGCATAATATTTGTTCAACAGAACTTATTTGTCTTGACTTGTCGAATAGTTGTTTTGATACACTCCAGCCATTTACGAAGAAGTTCCACACTTTAAGCCGCATGAATTTTAGAAATTGCCAATTTCTACAACAAATTCCAGATTTATCTGGAGTTTTTAATTTAAGAGAATTGTGGCTTGATGATTGCACAAATTTAGTTGAAATCCATCATTCAGTTGGGTGTTTAAATAAATTGAAGGAATTGAGTGCCATGCGATGCAATAGCTTGGAAATTTTGCTTCCAGACCTTAGACTGGTATCTCTTGAGAATCTCAACCTCTATGGTTGTTCAAGGCTCTATAGTTTCCCAGAGATATTGATTGAGATGAAATATATGCGAAATCTTCACTTGGGTAGAACAGCCATTATTGTGTTGCCATCTTCAATTTGTAATCTCATTGGACTTGAAACCTTAAACATAGAGGAATGTCCTTATCTTGAGCAACTACCAACTACCATTTGTTTGCTGCCAAATCTTTGGGAGCTAAATGCAACTTCTTCTAAAGTATTGTCTCATATAAAGATGTATAAGGAAGGACAAGAAGAAAACTTGGATTGCTATGCACTGTCTTTGAAATTGGAACGTTTTTGCTTCTCAAAATGCAATTTATCAGATGACTCTCTTGCTCTTTGCCTCTCTCACTTCACTAATATGATACATTTAGATATAAGCTTCAGTAGTCGTGTTACGACCCTTCCAGCATGCATCAAGGAATGTCACCATTTGAAATATCTTTCCCTGGATCATTGCAACCGACTTCAACATATTGAGGAGATGCCACCAAACTTGGAAAAATTCAGTGCCATATGTTGCATGTCATTGACAAAAAGATCTGAAAGCAGAGTATTGTATCAGGTACTCAACTTGCAACCTGGGAAAACAAACTTTATCTTTCCTGGAGGTAAATTCCCAGAAAATCTTGATAGTTATAGTAGGAGAAGCTGTGTGTCTTTTTGGGTTCGTGATGTGTTTCCAACAATTTTTATATGGATTCTTGTGAAACAAGATCAGGATTTTCTCTTCAGTTGTTCATTCTTGGTGCACGTCAATGACGTCAAGCTAGATATTTCTTCTGAGTGGCTTCTGTTTCCATCAAGAGCAATGCCCAAGAAATGA 2976 0.3726 MAQPAVSSCIDYKWKYDVFPSFHGEDTRLSFVSFLRGSLHERGIRVFMDDEHIRTGEEITPALIKAIRESRIAIIVFSENYANSTFCLQELVEILECFKEEGRLIYPVFYYVDPSELRRPRASYAEALARLEKRFKDNKQQVENWRLALSQAANLKGCHLKAKIANEQEHITEITNEVSARIHRIHNHLHVTRYPVGLVSRVKKVVSHLDLCSTKKNKMVGIVGLGGIGKSTIARVLYNLISDHFEGLCFLFDVRKNSKMPNGLARLQETLLCKLVKEKDLKLGDWYEGIPIIKHRLGHKKILLVIDDVDELKQLEALAGNCDWFGPGSRIVITTRDKQLLVSHHVKSIYNVEELNDEESLQLLCWCAFEKENVEFDFMEVSKRAIRYCCGLPLVLEVTGSYLCGRGVNEWHSALDQFKRIPEGKVLEVLRLSYDALGEFEKEIFLHLACFSKGEELGEVKGMLLCLYGIPLDNVINVLVNKSLIRIEGDQVLMHDVIEDMGKEIVRQESPDEPGKRSRLWFYQDILHVLNRNTGTNKVGVIFLDLPEDFSEDNEVQMQWSGKAFMKMTNLKILVIKNASFISKCPTHLPKSLKWLKWKGYPFKFLPHNICSTELICLDLSNSCFDTLQPFTKKFHTLSRMNFRNCQFLQQIPDLSGVFNLRELWLDDCTNLVEIHHSVGCLNKLKELSAMRCNSLEILLPDLRLVSLENLNLYGCSRLYSFPEILIEMKYMRNLHLGRTAIIVLPSSICNLIGLETLNIEECPYLEQLPTTICLLPNLWELNATSSKVLSHIKMYKEGQEENLDCYALSLKLERFCFSKCNLSDDSLALCLSHFTNMIHLDISFSSRVTTLPACIKECHHLKYLSLDHCNRLQHIEEMPPNLEKFSAICCMSLTKRSESRVLYQVLNLQPGKTNFIFPGGKFPENLDSYSRRSCVSFWVRDVFPTIFIWILVKQDQDFLFSCSFLVHVNDVKLDISSEWLLFPSRAMPKK 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3851g00001 991 Pfam NB-ARC domain 202 424 IPR002182 GO:0043531
Pral3851g00001 991 FunFam Disease resistance protein (TIR-NBS-LRR class) 12 184 - -
Pral3851g00001 991 SUPERFAMILY L domain-like 507 908 - -
Pral3851g00001 991 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 157 IPR035897 -
Pral3851g00001 991 Gene3D - 186 351 IPR027417 -
Pral3851g00001 991 Gene3D Ribonuclease Inhibitor 806 910 IPR032675 -
Pral3851g00001 991 Gene3D Ribonuclease Inhibitor 550 805 IPR032675 -
Pral3851g00001 991 ProSiteProfiles TIR domain profile. 14 182 IPR000157 GO:0007165
Pral3851g00001 991 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 773 IPR044974 GO:0006952
Pral3851g00001 991 Pfam TIR domain 15 184 IPR000157 GO:0007165
Pral3851g00001 991 PRINTS Disease resistance protein signature 389 403 - -
Pral3851g00001 991 PRINTS Disease resistance protein signature 219 234 - -
Pral3851g00001 991 PRINTS Disease resistance protein signature 296 310 - -
Pral3851g00001 991 PRINTS Disease resistance protein signature 703 719 - -
Pral3851g00001 991 Gene3D - 354 438 IPR042197 -
Pral3851g00001 991 SMART till_3 15 155 IPR000157 GO:0007165
Pral3851g00001 991 Gene3D - 10 185 IPR035897 -
Pral3851g00001 991 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 448 IPR027417 -
Pral3851g00001 991 Coils Coil 121 148 - -
Pral3851g00001 991 SUPERFAMILY "Winged helix" DNA-binding domain 425 530 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3851g00001 Pral-Chr3851 8443 13569 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3851g00001 4 783 WRKY Transcription Factor Family AT4G12020 30.386 6.87e-72 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3851g00001 - - pcin:129311747 1335.09