Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3850g00027 ATGGCTATGATATCTTGTTCTTACGCTCAAGGATGGACCTATGATGTTTTCCTGAGTTTCAGGGGCACGGACACCAGAAGAAGTTTCACCGGCTTTCTTTATCATGCTCTGCGTCAGAAGGGGATTAACGCATTCATAGATGATGAGGAGCTTAAGAGAGGGAAAGAAATTTCTCCATCTCTTCTGAAAGCAATTGAAGAGTCAAGGATTTCTATTATTGTATTCTCTGAAAACTATGCATCTTCCACATGGTGTCTGGAGGAGCTTGTTAAGATCCTTGATTGCATGAAGGTCAAGGGGCAATTGGTTTTGCCAGTTTTTCACCACGTAGATCCCTCAGTGGTACGCCATCAAAAGGGAAGTTTTGGCATAGCCATGGCCAAGCATGGAGATAGGTTCAAGAATAATACGAAGAAGGTGCAGAAGTGGAAGTTGGCTTTGTCTGAAGCAGCTAACTTGTCTGGTTGGAGCTTAGAAAACGGGTATGAATTTGAGATTATTCAAAGGATTGTTGAAGAGGTCTCTGGTAAATTAAATCACACCCTTATGCACATTGCCGAATATCCAGTTGGACTAGAAACTTGTTTATCAGAAGTGAAATCACTTTTGCATATGGAGCCAGGTGAACAAATTCGAATGATAGGAATCTATGGATTTGGAGGTATAGGAAAAACAACAATTGCTAGAGCTCTATTTAACTTGATTGCCAATGAATTTGATGCTGCATGTTTCCTTGCTGATATTAGAGAAAGTTCAAATCAACCAAAAGGCTTAGCACAGCTCCAAGAAGCACTTCTTTTTGATTTGGTTGGAGACAAGAACATTAAGCTAGGAAATATTTACAAAGGAATCCCCATTTTGAAGAAAAGATTGTGTTGCAAAAAAGTTCTTTTGATTCTTGATGATGTTGACAAATTAGAGCAGCTACAAGCTTTAGCAGGAGGACATGATTGGTTTGGTTCTGGTAGTGTAATTGTGATCACAACAAGAGATAAACACTTACTAGCTACTCATCAAGTTGAAAAAACATACGAGGTAAAGAAGCTACATCATGATGAAGCATTTGAACTGTTCACTTGGAATGCCTTCAAAAGAAAATCCCCGGATTCAGGTTATTTTGAGATTTCACACCGTGTGGCGCTATATGCCGAAGGGCTTCCATTGGCTTTGAAAGTAATGGGTTCAAATTTGTATGGTAAAACAGTGGATGAGTGGCAAGATGCATTGGACAAATATGAAAAGATTCCCAACAAAGAGGTTCAGAATGTACTCAGAGTAACCTATGATAATTTGGAGGAGAATGAGAGAGAAATTTTCCTAGACATTGCATGCTTCTTCAAAGGGGAGACAGTAGAATATGTTGAAAAGACGCTAAAAGCTTGTGGTTTCTATCCAAAAATTGGTATCGGTGTCCTAATTGATAGATCTCTTGTAACTATTGATCGGTATAACAAATTAAGAATGCATGATCTAATACAAGACATGGGAAGGGAAGTTGTAAGAGAAGATTCTCCATTAGAGCCTGGAAATCGAAGTAGAATTTGGCACCCTGAAGATGTTTATGAAGTACTTACTCAAAATACTGGATCAAGGAAAATTCAAGGCATGATGGTGGACCTCCCAGATCATTATATGGTACACTTGACAGCAAGCACCTTTAAAAGGATGAGAAATATGAAAATTTTTATAGTTAAGAACGCACACATTTTTGGGAGCCCTCAACATCTTCCAAACAATTTAAGATTGCTTGATTGGATGGAATACCCCTCCTCATCATTACCATCTAATTTTCGTCCAAAGAAACTTGTTGGACTCAACTTATCTCGTAGTTGTTTTGCCATGCAGGAGCCATTCAGGTATTTTGATTCTTTGACATCTATGGATTTGAGCCACTGCGATCACTTAACAAAACTTCCTGACATTTCTGGAGTTCCAAATTTGACAGAATTAAATCTTGATTATTGTGCAAATTTAGAAGAGGTTGATGATTCTGTTGGATTTCTTGATAAACTTGTCGAGTTGAGGGCTTCTGGATGCACCAAACTAAGGGCATTTCCACGTGCCATTAGGTTGCCATCACTCAAAAGTCTGATCCTTATATGGTGTTCAAGCATTCAAAGATTCCCAGATATCTTAGGAAAAATGGACAATCTCGTATCCATTTCTATTGAAAGTAGTGGCATAGAAGAATTACCAGCTTCCATTGGAAACCTTATTGGACTTCAGGAACTATGCATGACATCTTGCTTAGGTCTCAAGGAACTACCAGAAAGCCTTGACATGCTACAAAATCTAAGAAACCTTAACATAGAGGGTTGTCCACAACTTCGAAATTTTTTGAAGAAATTGAAAGACATGGGACAGCATACCCCTACCTTCCATAATGTTGATTCATTGAATCTAGAAAATTGTGGCCTATTGGATGAAGATCTTCCCATAATTTTACACTCTTTTCCAAAGTTGACTTCACTAGACCTTTCAGGGAACAAATTTGAAATGCTTTCATCCTGCATACAGGAGTTTCTTTACTTGCAATTACTTCACTTAAACAGTTGCAAGTTTCTCCAAGAAATTCCAACCTTACCTCCCAATTTACGATTCATTGATGCAAGTAATTGCACATCATTGAATAGAGAGTCGTCAAGTTCATTATTGAGTCAGGAAAGGGAGTTACATGTTATTGTGCCTGGAGCAAGCATTCCGACATGGTTTGATCTCTGCAGCAAAGAAGAATATATGACATTTTGGGTTCGTGAGAAATTTCCAGTGATTGCCCTATGTTATGTTTTTGCAGTAGAGGGTGAAATGAAGAAGGAGGGTTTCAGTTGCGAAGTTCGCTTTTTCATTAATGGTGAAGAATTGTTTGAATTGGAAATACCAACAAGCTTCGCAAAAATGGTGACAGATCATGTTTGGCTATTTGATTTGCGAACGCTGCCTCCCTTCCAGGGGAAAGCGTTTGATTCTTATTTGGATGATAACTGGAATCAGGTGGAGATTTCTTGTGAAAAAATGTCTGAAGTTCCAAGTGTAACTGTGAGTTGGTGTGGGATACATGTAATCCAACAAGAAGAAAATGCGATCAGATTCACAGACCCCTATTTGGATTCTGATTCTGTCACAGAATCTGATAACAAAGAGACTGAACTGAAGAAGCTCACTAGTAATAACAAGTCAGTGGAAGATTTTCAAGTCTTCAAAGATAATTGTCACAATGTGAATGATAACTGGGAAGCCTGTGAGGCAGAGGATAGCCAAATGCTTGAATGCAAGGGAAATGAGATAAACAAAACTCAGGATGATGAGGAAATGGAAGCATTTTATGCTTCTTTAGATGCTGAGATCTTTGTTCCATTACCTTCAAAAGATATCACATCTATTTCTGAATTGAAAACTGATATCAAACCAAGTGAAGGAATCCAAAAAGCATGGAAGACATTTCAAGAATTTCTCACCAAAGATTTTTCTGAAATGTTGGAGCCTAAAAATTATAGTACCATGAAAGCTACATTGGATTGCCTCTCTGGATTATCTGCAGATGATGGAGTGTCAATAGAAATGAGATCAGTGATAATAGAAGTTTCAAGAGAATTTACTCATTGGAGTTGCGATTATAGCAATGCAAGCAAGAAAATGAAGATTACCGAAGCCAGCGTGTTGAAAATGCATGAAACAACTGAAAGTCTTGAAGCTAACAAGAGCCATTTCAAGGAGGTGATGACCATGAAAAATGAGCTGCACAGCCAATTGGCCTATTTGGAGGAGAGAAAGAAAGAGCTGGAGGATCAAATCAACGCCATTAAATCTGATATCAGGGCTTTCGAATCAGCTGAGAAAATGGTTACTAAGAGAAAGAGAGAAATTTTTGAGGAAGGAAAGCTTCTCCTAGCTCAAAGAGATGAGTTGAGAGAACAATTGCCACGCTTGAGAGATGACTGGGCACTGGCCAAGGAGATCCACGCAAATATCAGTACCGAATGGTCAAAACTTGGAGAGAAAATAAACAACAAAAGCGTATATAGGTGTTTTTGA 4032 0.3847 MAMISCSYAQGWTYDVFLSFRGTDTRRSFTGFLYHALRQKGINAFIDDEELKRGKEISPSLLKAIEESRISIIVFSENYASSTWCLEELVKILDCMKVKGQLVLPVFHHVDPSVVRHQKGSFGIAMAKHGDRFKNNTKKVQKWKLALSEAANLSGWSLENGYEFEIIQRIVEEVSGKLNHTLMHIAEYPVGLETCLSEVKSLLHMEPGEQIRMIGIYGFGGIGKTTIARALFNLIANEFDAACFLADIRESSNQPKGLAQLQEALLFDLVGDKNIKLGNIYKGIPILKKRLCCKKVLLILDDVDKLEQLQALAGGHDWFGSGSVIVITTRDKHLLATHQVEKTYEVKKLHHDEAFELFTWNAFKRKSPDSGYFEISHRVALYAEGLPLALKVMGSNLYGKTVDEWQDALDKYEKIPNKEVQNVLRVTYDNLEENEREIFLDIACFFKGETVEYVEKTLKACGFYPKIGIGVLIDRSLVTIDRYNKLRMHDLIQDMGREVVREDSPLEPGNRSRIWHPEDVYEVLTQNTGSRKIQGMMVDLPDHYMVHLTASTFKRMRNMKIFIVKNAHIFGSPQHLPNNLRLLDWMEYPSSSLPSNFRPKKLVGLNLSRSCFAMQEPFRYFDSLTSMDLSHCDHLTKLPDISGVPNLTELNLDYCANLEEVDDSVGFLDKLVELRASGCTKLRAFPRAIRLPSLKSLILIWCSSIQRFPDILGKMDNLVSISIESSGIEELPASIGNLIGLQELCMTSCLGLKELPESLDMLQNLRNLNIEGCPQLRNFLKKLKDMGQHTPTFHNVDSLNLENCGLLDEDLPIILHSFPKLTSLDLSGNKFEMLSSCIQEFLYLQLLHLNSCKFLQEIPTLPPNLRFIDASNCTSLNRESSSSLLSQERELHVIVPGASIPTWFDLCSKEEYMTFWVREKFPVIALCYVFAVEGEMKKEGFSCEVRFFINGEELFELEIPTSFAKMVTDHVWLFDLRTLPPFQGKAFDSYLDDNWNQVEISCEKMSEVPSVTVSWCGIHVIQQEENAIRFTDPYLDSDSVTESDNKETELKKLTSNNKSVEDFQVFKDNCHNVNDNWEACEAEDSQMLECKGNEINKTQDDEEMEAFYASLDAEIFVPLPSKDITSISELKTDIKPSEGIQKAWKTFQEFLTKDFSEMLEPKNYSTMKATLDCLSGLSADDGVSIEMRSVIIEVSREFTHWSCDYSNASKKMKITEASVLKMHETTESLEANKSHFKEVMTMKNELHSQLAYLEERKKELEDQINAIKSDIRAFESAEKMVTKRKREIFEEGKLLLAQRDELREQLPRLRDDWALAKEIHANISTEWSKLGEKINNKSVYRCF 1343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3850g00027 1343 PRINTS Disease resistance protein signature 383 397 - -
Pral3850g00027 1343 PRINTS Disease resistance protein signature 213 228 - -
Pral3850g00027 1343 PRINTS Disease resistance protein signature 619 635 - -
Pral3850g00027 1343 PRINTS Disease resistance protein signature 290 304 - -
Pral3850g00027 1343 ProSiteProfiles TIR domain profile. 12 178 IPR000157 GO:0007165
Pral3850g00027 1343 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 442 IPR027417 -
Pral3850g00027 1343 Gene3D - 7 181 IPR035897 -
Pral3850g00027 1343 Gene3D - 182 346 IPR027417 -
Pral3850g00027 1343 Gene3D - 348 432 IPR042197 -
Pral3850g00027 1343 Pfam TIR domain 14 183 IPR000157 GO:0007165
Pral3850g00027 1343 SUPERFAMILY "Winged helix" DNA-binding domain 419 524 IPR036390 -
Pral3850g00027 1343 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 710 IPR044974 GO:0006952
Pral3850g00027 1343 SUPERFAMILY L domain-like 536 891 - -
Pral3850g00027 1343 Pfam NB-ARC domain 194 426 IPR002182 GO:0043531
Pral3850g00027 1343 SMART till_3 13 153 IPR000157 GO:0007165
Pral3850g00027 1343 FunFam Disease resistance protein (TIR-NBS-LRR class) 10 180 - -
Pral3850g00027 1343 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 156 IPR035897 -
Pral3850g00027 1343 Coils Coil 1243 1277 - -
Pral3850g00027 1343 Gene3D Ribonuclease Inhibitor 524 706 IPR032675 -
Pral3850g00027 1343 Gene3D Ribonuclease Inhibitor 707 894 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3850g00027 Pral-Chr3850 217042 221973 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3850g00027 14 779 WRKY Transcription Factor Family AT4G12020 30.139 8.63e-89 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3850g00027 - - psat:127127957 1688.32