Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3847g00003 ATGGCGGATTTGGAAAAAGATGAGGTGCCAATGCTGTCGGAGACAGAACAACCGTCAGTTGAATTTGGGGATTCTAAATTACGAAGGCTTGTATCGAGGACACGAAGTGCCTCAATATCTATTCCTATGAGCTCCATGGAGCCATATGAGAGAGCAACTAGTCTTGTGGGACATACTGGTCCGCTGAGGAGTGAGAGGAAAACCCCCTTTGTGCAGATGAGTGGTCCTCTATATGTTACCAACAGACATGGGAGTCTTTCCCGACAGAACGTCAATGCCACAGGGAACAAAACAGTAGAAGGCATGACAGAAAAATTTGCTTTGCATGGAAGTGTTGGTAATGATTGGCAGAACAATTATGCCCACAAAAATGAACACTTACTGAGGTCTGGGCAATTGGGAATGTGTAATGATCCTTATTGTACAACTTGCCCCACTTACTTCAAGACCTCTCAGCAAAGGAACCCTAAGGCTTCTGGTTTATTTGATCCCAAGTTCCACAATGCTCTCTATGGAGATGCTAAGGGTTGTGCAAGAAGATTTATTTCTTTTCTGTCTTCATATGTTCCTGGAGTTATGAATCCTCATGCTAAAGTTGTACAGCGTTGGAACAAATTTTTTGCCATTTCTTGCTTAGTGGCAATTTTTGTGGATCCATTATTTTTCTTCTTGCTCGGTGTAAAAAAGATTGACAGATGTATTTTCATCGACTGGAAGTTGACATGGGCACTTGTTTCTGTTAGATCCATGAATGATTTCGTATACTTCCTAAATATGCTTCTTCAGTTTAGGTTGGCTTATGTGGCTCCTGACTCTAGGGTGGTTGGTGCTGGCGATTTAGTTGACCATCCAAAGAAAATTGCTCTCCATTATTTGCAGCGTTTATTTCTTATTGACTTATTTGTTGTATTTCCACTTCCTCAGATAATGATATTGTTTGCCCTGCCATATCACTTGGGTTCATCAGGAGCAAATTATGCTAAGAATCTTCTACGTCTAGCAGTCCTTGTTCAGTATGTTCCCAGATTGTGCAGGTTTCTGCCTCTTCTAATTGGTCAGTCTCCAAGTGGTTTCATATTTGAGTCAGCATGGGCAAATTTCTTTATAAATCTTCTCACCTATATGCTATCTGGCCATGTTGTTGGGTCTTGCTGGTATCTCTTTGGTCTACAGAGGGTCAATCAATGTCTTCGAAATTTCTGCCATAAGGAGGAATTTGCTCAGTGCATGCAATTGATTGATTGTGGGCATGGTCATAGAGAAACCCATCAGTCTTCTCTTTTGCTCAATGAAACCAATCATTTTAAACAGACTTGGTTAGATAGTCCTGGTGTAGGCAGTTGTTTCAAAGCCTCAGAAGATGAAGGTTTTCAGTATGGGATCTATGAGAAAGCTGTTAACCTTGTTACAGAACACAGTGTGGTCACGAGATATGTGTATTCATTGTTTTGGGGATTCCAGCAAATCAGTACTCTGGCTGGGAACTTAGTCCCTAGCTATTTTGTTGAAGTCCTTTTTACAATGGGCATCATAGGACTGGGACTCTTGCTTTTTGCTCTTCTCATTGGACATATACAGAACTTCCTTCAGGCTCTTGGACGGAGGAGGCTAGAAATGTCACTTAGACGTCGTGATGTGGAGCAATGGATGAGCCACCGGCGCTTGCCTGAAGATCTAAGAAGGAGAGTAATACTGGCTGAACGATATAATTGGGCTGCAACAAGAGGAGTAAATGAAGAAATGCTTCTGGAGAGTTTGCCGGAGGATCTTCAGAGAGATATTAGACGTCATCTCTTCAAATTTGTTAAGAAAGTTCGAATTTTTGCCTTGATGGATGAGCCTATCTTAGATGCCATTTGTGGGAGACTAAGACAAAAAACATACATCAAAGGAAGCAATATTTTGTATCATGGTGGTCTGATAGACAAAATGGTGTTCGTTGTGCGTGGAAGATTAGAGAGCACTGGAGATGATGGGATCAGGGTTCCCTTAGTTGAAGGGGATGTGTGTGGTGAAGAACTCTTGACATGGTGTCTCGAACATTGTTCTGTGAACAAAGATGGTAAAAAAGTAAGGCTTCCTGGACAAAGATTGCTCAGCACCAGGACTGTACGTTGCTTAACAAATGTGGAGGCATTTTCGCTCCGATATGCAGACCTTGAAGAAGTCACTAGCCTTTTTACAAGATTCCTAAGAAATGCGCGGGTTCAAGGAGCCATAAGGTATGAATCGCCTTATTGGAGAAGCCTTGCAGCAACTCGCATTCAGGTTGCATGGAGATACAGGAAGAAACGTCTCAGTCGTGCTGATACCTCGCAGTCAAATCTTTAG 2331 0.4217 MADLEKDEVPMLSETEQPSVEFGDSKLRRLVSRTRSASISIPMSSMEPYERATSLVGHTGPLRSERKTPFVQMSGPLYVTNRHGSLSRQNVNATGNKTVEGMTEKFALHGSVGNDWQNNYAHKNEHLLRSGQLGMCNDPYCTTCPTYFKTSQQRNPKASGLFDPKFHNALYGDAKGCARRFISFLSSYVPGVMNPHAKVVQRWNKFFAISCLVAIFVDPLFFFLLGVKKIDRCIFIDWKLTWALVSVRSMNDFVYFLNMLLQFRLAYVAPDSRVVGAGDLVDHPKKIALHYLQRLFLIDLFVVFPLPQIMILFALPYHLGSSGANYAKNLLRLAVLVQYVPRLCRFLPLLIGQSPSGFIFESAWANFFINLLTYMLSGHVVGSCWYLFGLQRVNQCLRNFCHKEEFAQCMQLIDCGHGHRETHQSSLLLNETNHFKQTWLDSPGVGSCFKASEDEGFQYGIYEKAVNLVTEHSVVTRYVYSLFWGFQQISTLAGNLVPSYFVGXVLFTMGIIGLGLLLFALLIGHIQNFLQALGRRRLEMSLRRRDVEQWMSHRRLPEDLRRRVILAERYNWAATRGVNEEMLLESLPEDLQRDIRRHLFKFVKKVRIFALMDEPILDAICGRLRQKTYIKGSNILYHGGLIDKMVFVVRGRLESTGDDGIRVPLVEGDVCGEELLTWCLEHCSVNKDGKKVRLPGQRLLSTRTVRCLTNVEAFSLRYADLEEVTSLFTRFLRNARVQGAIRYESPYWRSLAATRIQVAWRYRKKRLSRADTSQSNL 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3847g00003 777 ProSiteProfiles cAMP/cGMP binding motif profile. 608 676 IPR000595 -
Pral3847g00003 777 Pfam Ion transport protein 203 536 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pral3847g00003 777 MobiDBLite consensus disorder prediction 1 20 - -
Pral3847g00003 777 SMART cnmp_10 608 740 IPR000595 -
Pral3847g00003 777 Gene3D Jelly Rolls 606 730 IPR014710 -
Pral3847g00003 777 Gene3D Helix hairpin bin 536 600 - -
Pral3847g00003 777 Gene3D - 203 533 - -
Pral3847g00003 777 CDD CAP_ED 608 724 IPR000595 -
Pral3847g00003 777 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 136 770 - -
Pral3847g00003 777 SUPERFAMILY Voltage-gated potassium channels 198 537 - -
Pral3847g00003 777 SUPERFAMILY cAMP-binding domain-like 536 732 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3847g00003 Pral-Chr3847 26456 38713 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3847g00003 5 686 Ion Channels AT3G17700 62.009 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3847g00003 K05391 - qsa:O6P43_005264 1134.01