Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3846g00014 ATGGTGATCGCATCCACAGTCAGGGAGCCAGAAACCAGAGAGCACGTGAACTGCACTTTTGCCTCCAGATATGTGCGCGACCCAATTCCCAAGTTTAAGATGCCGGAGAAGTCGATACCGAAGGATGCAGCCTATCAGATTATAACGGACGAGTTGATGCTGGACGGAGCACCCAGGCTCAACTTGGCTTCTTTTGTCACCACTTGGATGGAGCCTGAGGTCGACAAGCTAATCATGTCCTCCCTTAACAAGAACTACGTTGACATGGATGAGTACCCTGTTACCACTGAGCTCCAGAATCGATGTGTGAATATGATAGCTCATCTATTCAATGCTCCTATTGAAGAAAATGAGGCTGCAGTGGGTGTGGGAACTGTGGGTTCATCAGAAGCAATCATGCTGGCTGGTCTTGCCTTTAAAAGAAAATGGCAGATAAAGAGAAAATCAGAAGGCAAACCATGTGATAAACCCAACATAGTTACTGGAGCAAATGTTCAGGTTTGTTGGGAAAAATTTGCAAGGTACTTTGAGGTGGAGCTGAAGGAGGTGAAGCTAAGTGAGGGATGTTATGTGATGGACCCAAAGAAAGCAGTGGAATTAGTGGATGAGAACACTATTTGTGTTGCAGCAATATTGGGTTCAACTCTGACAGGAGAGTTTGAGGATGTAAAGCTGTTAAATGAGCTTCTTACAGAGAAGAACAAGGAGACAGGATGGGACACTCCAATTCATGTGGATGCTGCAAGTGGAGGCTTTATTGCTCCATTCTTGTTCCCTGATCTTAAGTGGGATTTTCGTTTGCCGTTGGTTAAGAGTATTAACGTTAGTGGTCATAAGTATGGTCTTGTGTATCCTGGTGTTGGTTGGGTTGTCTGGAGGAATAAGGATGACTTGCCTGATGATCTAGTCTTCCATATCAACTATCTTGGCTCTGATCAGCCCACTTTCACCCTCAACTTCTCCAAAGGCTCTAGTCAAATAATTGCTCAATATTATCAGTTCATTCGTCTTGGCTTGGAGGGTTACAAAAACATCATGGAGAACTGCATGGAGAGTGCGAGAGTACTGAAGGAAGGAATAGAGAGAACAGGTAGGTTCAACATTCTGTCCAAGGACATGGGAGTGCCAGTGGTAGCCATATCTCTGAAAGACAGCAGCCAGCACACAGTTTTTGAGATATCAGACCATCTCCGGCGGTACGGGTGGATTGTTCCGGCCTATTCAATGCCGCCAGACGTGCAGCACGTGGCGGTGCTGCGGGTGGTCATCCGGGAGGACTTCAGCCGGGGCCTGGCAGAGAGACTTGTGTCTGACATTGATAAGGTTCTAAAGCTCTTGGACACACTCCCTAGTCCTTTGTCCCTTAAAGCCGCTCATGTCAGTACCGTAGCTAATGAGACTGGTCATCACAAGAAGAGTGGAATGGAGATTCAAGCAGAGGTTGTGGCATCGTGGAAGAGACTTGTGGAAGGCAAAAGAACTGGGGCCTGCTAG 1494 0.4692 MVIASTVREPETREHVNCTFASRYVRDPIPKFKMPEKSIPKDAAYQIITDELMLDGAPRLNLASFVTTWMEPEVDKLIMSSLNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPIEENEAAVGVGTVGSSEAIMLAGLAFKRKWQIKRKSEGKPCDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGCYVMDPKKAVELVDENTICVAAILGSTLTGEFEDVKLLNELLTEKNKETGWDTPIHVDAASGGFIAPFLFPDLKWDFRLPLVKSINVSGHKYGLVYPGVGWVVWRNKDDLPDDLVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGLEGYKNIMENCMESARVLKEGIERTGRFNILSKDMGVPVVAISLKDSSQHTVFEISDHLRRYGWIVPAYSMPPDVQHVAVLRVVIREDFSRGLAERLVSDIDKVLKLLDTLPSPLSLKAAHVSTVANETGHHKKSGMEIQAEVVASWKRLVEGKRTGAC 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3846g00014 497 Gene3D - 1 67 - -
Pral3846g00014 497 NCBIfam glutamate decarboxylase 19 446 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pral3846g00014 497 FunFam Glutamate decarboxylase 8 67 - -
Pral3846g00014 497 Pfam Pyridoxal-dependent decarboxylase conserved domain 35 383 IPR002129 GO:0016830|GO:0019752|GO:0030170
Pral3846g00014 497 CDD DOPA_deC_like 61 441 - -
Pral3846g00014 497 Gene3D - 68 362 IPR015421 GO:0003824
Pral3846g00014 497 FunFam Glutamate decarboxylase 68 362 - -
Pral3846g00014 497 PANTHER GLUTAMATE DECARBOXYLASE 1 497 IPR010107 GO:0004351|GO:0006536|GO:0030170
Pral3846g00014 497 FunFam Glutamate decarboxylase 363 450 - -
Pral3846g00014 497 SUPERFAMILY PLP-dependent transferases 14 445 IPR015424 -
Pral3846g00014 497 Gene3D - 363 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3846g00014 Pral-Chr3846 153226 156579 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3846g00014 1 497 Calmodulin-binding Proteins AT5G17330 75.197 0.0 796
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3846g00014 K01580 - gmx:100796475 867.455