Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3846g00007 ATGGCGGACACAAACTCTGTTGAAGTTATATTGGACTTTCTGAGGAAGAATCGTTTTACAAGGGCTGAAGCAGCATTGCGTGGGGAGCTTAATAGCCATCCTGACTTAAATGGCTTTCTTGAGAAGCTTTCCTTGGAAGAAAAGGCCTTGCATAGTAATTCAGAAAATGACAACAAGGGGAGGCCAGTTGTAGAAGTTCAAGGGTCAGGTTCTCACAATACCGTTGAAGTGTCAAAAGAACTCATTGTGAAGGAAATAGAGTGTGGGACTGGTAGGAATGAAACTGAACGCAAATGGAACAATGTACCTTCTATTGGGGAACGGAATAAATTAAATGAAGTGGTTGGGACAAGTGACAAAAGTTCAGCTTTCTCTAAAAGTTCAGAGGACGGGGTGCTGGATTTATACTCGTGGAAGTTCAATCCTGGCAATGGTCCCGTGGAGCCTTTCCAAAATGATGTGGGCACAAGTTCCAATAATTGTTTTAAGGGTCCGTCATCTCAGCAGTCAAAATATCAAACAAGTGAAGCTCTTGATGTGTCCAGCACCGTTGCAAAATCTGGAGGGGAAAATACTGTTTCCACTGATAAGAAAGCCTCATGGCTTGGAAGTAGTATTACTAGAGCATCTGTGGAACAAAAGCATCAAAGCTTGCAAGCCAAAGAACCTAGGGAATCTGATCGGCAGCTTAAATTTAACAATTCATCTTTTAAAGAGAACTTTGCAGATAATCCCTGGTCAACATCTGATGAGAATGTTAATTCATCTTCGGACATTTGGAGAGACTGTTCCGTCAAGACTGTTTTCCCCTTCTCTAAGGGTGACGTTTCTTCACGTTGTGATAATGCACCTTATACAGACAAGAAAGAGGAAAAAAGAAGGGCGGATATAAGTGATATTCGTGCATCAATAAAAGAGCAAGTAGATGAAGTTGGTCGAGCTATATACTTAGGCAAGTCACAAGGCAGTTCAGAACAGAAGACTATTGGTAGCATAAGTTTCCCTCTTGCTCCTGGGAACCAGAAGGAAGAATTTCCTAGGCTTCCTCCTGTTAGACTAAAGTCAGAGGATAAGCCTTTGGCTATTAACTGGGAGGAAAAGTTTGAGCGTGATGGACCTGCTTCAAGGGTAGCAGGTGCTGATGGCTCCTTAATCATTGGATCATATCTGGATGTGCCTGTCGGACAAGAAATTAATCCTTCAGGTATGAGGAGGGCTACAGGGGGCAGTTGGCTCTCTGTAAGTCAAGGGATAGCAGAGGATACATCTGATCTTGTGTCTGGTTTTGCTACAGTTGGTGATGGATTGAGTGAATCTGTTGATTATCAAAATGAATATTGGGACTCTGATGAATATGATGATGATGATGATGTTGGGTACATGAGACAACCTATTGAGGATGAATCCTGGTTTTTGGCGCATGAAATTGATTACCCTAGTGATAATGAAAAGGGGAATGGGCATGGAAGTGTTCCAGATCATCAAGACAGAGGTCCAGCCAAAGATGATGACGATGACCAATCTTTTGCTGAGGAGGATTCTTACTTCTCTGGAGAGCAATATCTTCAAGCAAAGAATGTTGAACCAGTCACAGCTTCTGATGATCCTATTGGTCTAACAGTAACTGAAGTGTATGACAGAACTGATGGGGGTGATCTAATGGCTCAATATGATGGGCAATTAATGGATGAGGAAGAATTGAATCTCATGCGTGCAGAACCTGTCTGGCAGGGCTTCGTCACTCAGACAGATGACCTAATCATGCTTGGAGATGAGAAGGTTCTTAATGAGAGTGGAAGATTGCGACTTGAGGATATGGATGATGATCACCATGGTTCCATTAGGTCAATTGGAGTGGGGATCAACAGTGATGCTGCAGATATTGGCAGTGAAGTGCGTGAAAGTTTGGTTGGTGGTAGCAGTGAAGGGGATTTAGAATATTTCCGTGACCATGATGTTGGACTTAGTGGCCCTAGACACCCTCATGACCTGAATAAGAAATCTATCAATAAATTGAGCAAATATAGGAAGAAAAATGATAAGAGTGAATCAAATAAACATGTCATTGAGGATGATAAAGCTACATTCTTGCAGATGAAACCTCATACTGATGGGTTCTCATTTCCCCTATCCCTGAAAGATGGTCCAACAATTCAGGCTGGCACTAGTATGCCCCCTTGGTCAAACTGCAATGCTGATGAGAATGATGACAGTCTTAATGCACTTGTGGGATCTGATGATAAGCTTGCTTTATGGAGGCGGGGTGATTCTTCACCCATGAAAAGTTCTAGGGATGAAAATAATGCTAATGTAAGGTCCTCTAACTCTTCTCCAACAGTCTCAAATTATGGATATATTGAAAAAGAGCATGTCAAGCTTGAAGGGGATGAAAAGGATGGTGGTGCAAGGGAAGAAGATCTTGGGGCATCACTGGAAGACGAAGAGGCTGCTGCTGTTCAAGAGCAAGTGAGACAAATAAAGGCACAGGAGGAGGAATTTGAAACCTTCAATCTAAAGATTGTGCACAGGAAAAACAGAACTGGCTTTGAGGAAGACAAGAATTTCCATGTTGTTTTAAATTCTGTAATAGCTGGGCGATATCATGTCACTGAGTATCTTGGATCTGCTGCATTCAGCAAAGCTATACAGGCTCATGACCTGCATACTGGCATGGATGTTTGTGTTAAAATTATAAAGAACAACAAAGATTTTTTTGATCAAAGCCTTGACGAGATCAAGCTTCTCAAGTATGTCAATAAGCATGACCCTGCGGACAAGTATCACATTCTTCGGTTGTATGATTATTTCTATTATAGAGAACATCTGTTAATAGTATGTGAGCTACTTAAAGCCAACTTATATGAGTTCCATAAATTTAATAGAGAATCAGGGGGGGAAGTGTACTTCACAATGCCAAGACTGCAGTCAATAACCATTCAATGTTTGGAAGCACTTCAGTTTCTGCACAGCCTTGGACTAATACATTGTGACTTGAAGCCTGAGAATATTTTGGTAAAAAGCTATAGCAGATGTGAGGTGAAGGTGATTGATCTTGGGAGTAGCTGTTTTGAGACAGATCACCTTTGCTCATATGTTCAGTCAAGGTCTTATCGAGCTCCAGAGGTTATTTTGGGACTCCCATATGACAAGAAGATTGATATCTGGTCACTTGGTTGCATCTTGGCAGAACTTTGTACTGGCAATGTCCTCTTTCAAAATGATTCACCGGCAACATTACTTGCCCGAGTGATTGGCATCATTGGTCCAATTGATCAAAGCATGCTTGCAAAAGGACGGGATACATACAAGTATTTCACCAAAAATCATATGCTTTATGAAAGGAATCAGGAAACCAACAGGTTAGAGTACCTTATTCCGAAGAAGACATCCTTGAGGCATAGATTGCCAATGGGAGATCAAGGCTTCATTGACTTTGTTGCGCATTTGCTTGAGATTAACCCAAAGAAACGGCCTTCTGCATCAGAGGCCCTGAAGCACCCATGGTTATCATACCCTTACGAACCAATATCATCTTGA 3537 0.4173 MADTNSVEVILDFLRKNRFTRAEAALRGELNSHPDLNGFLEKLSLEEKALHSNSENDNKGRPVVEVQGSGSHNTVEVSKELIVKEIECGTGRNETERKWNNVPSIGERNKLNEVVGTSDKSSAFSKSSEDGVLDLYSWKFNPGNGPVEPFQNDVGTSSNNCFKGPSSQQSKYQTSEALDVSSTVAKSGGENTVSTDKKASWLGSSITRASVEQKHQSLQAKEPRESDRQLKFNNSSFKENFADNPWSTSDENVNSSSDIWRDCSVKTVFPFSKGDVSSRCDNAPYTDKKEEKRRADISDIRASIKEQVDEVGRAIYLGKSQGSSEQKTIGSISFPLAPGNQKEEFPRLPPVRLKSEDKPLAINWEEKFERDGPASRVAGADGSLIIGSYLDVPVGQEINPSGMRRATGGSWLSVSQGIAEDTSDLVSGFATVGDGLSESVDYQNEYWDSDEYDDDDDVGYMRQPIEDESWFLAHEIDYPSDNEKGNGHGSVPDHQDRGPAKDDDDDQSFAEEDSYFSGEQYLQAKNVEPVTASDDPIGLTVTEVYDRTDGGDLMAQYDGQLMDEEELNLMRAEPVWQGFVTQTDDLIMLGDEKVLNESGRLRLEDMDDDHHGSIRSIGVGINSDAADIGSEVRESLVGGSSEGDLEYFRDHDVGLSGPRHPHDLNKKSINKLSKYRKKNDKSESNKHVIEDDKATFLQMKPHTDGFSFPLSLKDGPTIQAGTSMPPWSNCNADENDDSLNALVGSDDKLALWRRGDSSPMKSSRDENNANVRSSNSSPTVSNYGYIEKEHVKLEGDEKDGGAREEDLGASLEDEEAAAVQEQVRQIKAQEEEFETFNLKIVHRKNRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHTGMDVCVKIIKNNKDFFDQSLDEIKLLKYVNKHDPADKYHILRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALQFLHSLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLPYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIIGPIDQSMLAKGRDTYKYFTKNHMLYERNQETNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASEALKHPWLSYPYEPISS 1178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3846g00007 1178 Gene3D Phosphorylase Kinase; domain 1 861 948 - -
Pral3846g00007 1178 MobiDBLite consensus disorder prediction 478 510 - -
Pral3846g00007 1178 SMART serkin_6 867 1169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3846g00007 1178 MobiDBLite consensus disorder prediction 50 71 - -
Pral3846g00007 1178 MobiDBLite consensus disorder prediction 717 740 - -
Pral3846g00007 1178 CDD PKc_DYRK_like 867 1169 - -
Pral3846g00007 1178 FunFam Serine/threonine-protein kinase ppk15 946 1170 - -
Pral3846g00007 1178 SUPERFAMILY Protein kinase-like (PK-like) 856 1171 IPR011009 -
Pral3846g00007 1178 MobiDBLite consensus disorder prediction 656 687 - -
Pral3846g00007 1178 Gene3D Transferase(Phosphotransferase) domain 1 921 1169 - -
Pral3846g00007 1178 ProSitePatterns Serine/Threonine protein kinases active-site signature. 993 1005 IPR008271 GO:0004672|GO:0006468
Pral3846g00007 1178 MobiDBLite consensus disorder prediction 787 807 - -
Pral3846g00007 1178 PANTHER DUAL SPECIFICITY PROTEIN KINASE 410 1169 - -
Pral3846g00007 1178 ProSiteProfiles Protein kinase domain profile. 867 1169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3846g00007 1178 Coils Coil 819 839 - -
Pral3846g00007 1178 MobiDBLite consensus disorder prediction 153 175 - -
Pral3846g00007 1178 FunFam Putative serine/threonine-protein kinase dyrk2 861 948 - -
Pral3846g00007 1178 MobiDBLite consensus disorder prediction 717 738 - -
Pral3846g00007 1178 MobiDBLite consensus disorder prediction 762 783 - -
Pral3846g00007 1178 MobiDBLite consensus disorder prediction 752 811 - -
Pral3846g00007 1178 Pfam Protein kinase domain 867 1169 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3846g00007 1178 MobiDBLite consensus disorder prediction 478 504 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3846g00007 Pral-Chr3846 77381 89140 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3846g00007 866 1164 MAP Kinase Gene Family AT5G19010 31.348 4.86e-30 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-PRP4 Pral3846g00007 Pkinase 1.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3846g00007 - - gmx:100798608 1809.27