Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3844g00001 ATGCCCCAGAATAACAAGATTTTCAAAGACCCATCATCGAATCCGATGCCTGATCTTTCTCTTCACATAAGCCTTCCAAACAGTGCTCCTTCTTCAATTTGCACCGGAAATAACGAAGAAGCAGATTCGTCGTTTGATATATGGAGAAGCAGCACAGAAGTAGATGGCGTCAAATCCCACAGTGAGAGTTCAATCAGAGGAAGCCCTCAAGAACAAACCCATGTCGTCTCTCTCTTCAATCATCTTCCCACAAGTGGTTATGAGGCTGAGAGCCCCTGGAGGAGGAGGACGACGGCAAGATTGAACGACGTCGTTGTCCGAGGCAGGGAAGAAGAGGACGGTAGTGGTGGGTTTTGGGTTTCACAGGGACTCAATTCAAGAGCCACCAGAGGAATCCCACTTCATCAGGATTCTAATATTTCTCTAAACCCACTTCAACAATTTCCCTATCCTAATTACTCCTCAGCTTCTTCTTATCATAGTAGTTATAGGCCCTGCGACAATAATAACAGTGTTCTTGGTGGTGGTAATTATAACAACATGGTGGAGCACCCAATCTCGAGGTTTAATGGGATAAGTATGGAGAGTTTGATAAGACCCCATCAACCAAATCATCAGTTTCACTGCTTGAATCATCATCATCATCATCAGTTTGGTTCAAACTCTGATTTCTCAAACGGATTTGGAAGGTCCAAGATGTTGCCTAATAGGCTTCACAGTAACAAGAGGAACATGAGGGCTCCCAGAATGCGTTGGACTAGCTCTCTTCATGCTCGTTTTGTTCACGCCGTGGAGCTCCTTGGGGGCCATGACAGAGCAACACCTAAGTCAGTTTTGGAGCTCATGGATGTGAAAGATCTAACACTAGCCCATGTGAAGAGCCATTTGCAGATGTATCGAACTGTTAAGAACACTGACAAACCTGCAGCTTCCTCAGATGGAGATGAAGATTTCATGAGCCTAACGCCTCCACCACTAAATGAAAATGAGAACTATTTTTCACCCAACAAGAGAGGCCCTACAAATGCATCGTCTTTAGATCAGGATATGGCCTACACTGGCAGCAATCTGTGGAGTAATTCTTCTAGTAGAAGAGCATGGACACAAGCTAGTTCCAGAGATTTTGAAGGAATTAGACCACCAGACAATTTATCATCTTCTCATCAGCACATAACTGAGAAACAGTCTTCCGGGGGAAATAGTTTTTTGCAATCAAGAAGCTTGAAGGACTCTGAGAATTTAAGCTTGGAGTTTACCCTGGGGAGATCAACGTGGGAAAGCAACGAACGTGCCTAG 1296 0.4452 MPQNNKIFKDPSSNPMPDLSLHISLPNSAPSSICTGNNEEADSSFDIWRSSTEVDGVKSHSESSIRGSPQEQTHVVSLFNHLPTSGYEAESPWRRRTTARLNDVVVRGREEEDGSGGFWVSQGLNSRATRGIPLHQDSNISLNPLQQFPYPNYSSASSYHSSYRPCDNNNSVLGGGNYNNMVEHPISRFNGISMESLIRPHQPNHQFHCLNHHHHHQFGSNSDFSNGFGRSKMLPNRLHSNKRNMRAPRMRWTSSLHARFVHAVELLGGHDRATPKSVLELMDVKDLTLAHVKSHLQMYRTVKNTDKPAASSDGDEDFMSLTPPPLNENENYFSPNKRGPTNASSLDQDMAYTGSNLWSNSSSRRAWTQASSRDFEGIRPPDNLSSSHQHITEKQSSGGNSFLQSRSLKDSENLSLEFTLGRSTWESNERA 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3844g00001 431 Gene3D - 247 304 - -
Pral3844g00001 431 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 16 429 IPR044847 GO:0000976|GO:0006355|GO:0010158
Pral3844g00001 431 MobiDBLite consensus disorder prediction 324 348 - -
Pral3844g00001 431 MobiDBLite consensus disorder prediction 305 348 - -
Pral3844g00001 431 SUPERFAMILY Homeodomain-like 245 302 IPR009057 -
Pral3844g00001 431 Pfam Myb-like DNA-binding domain 249 300 IPR001005 -
Pral3844g00001 431 FunFam Myb family transcription factor 246 304 - -
Pral3844g00001 431 MobiDBLite consensus disorder prediction 382 408 - -
Pral3844g00001 431 NCBIfam myb-like DNA-binding domain, SHAQKYF class 248 301 IPR006447 GO:0003677
Pral3844g00001 431 MobiDBLite consensus disorder prediction 1 40 - -
Pral3844g00001 431 MobiDBLite consensus disorder prediction 369 408 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3844g00001 Pral-Chr3844 16808 24555 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3844g00001 227 425 G2-like Transcription Factor Family AT5G16560 53.398 8.35e-49 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral3844g00001 Myb_DNA-binding 2.1e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3844g00001 - - qsa:O6P43_008449 387.111