Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3842g00012 ATGGCTCTCGTCCGCGATCGCCGCCACCTCAACCTACGTCTCCCTCTGCCGGAGCCCTCCGAGCGCCGACCTCGCTTCCCGCTTCCCCTTCCACCCTCCTCTATTTCCTCTAACAATTCCGTCGCTGCCGATATTGCCCCTAACGATCTCGAAAAGCTTCAGGTCCTCGGCCACGGCAACGGAGGAACTGTCTATAAGGTCCGTCACAAGCGCACCTCCGTCGTCTATGCTCTCAAGGTCGTCCACAGCGACTCCGACCCCATGACCCGACGCCAAGTCCGGAGGGAGATGGATATCCTCCGCCGGACCGATTCGCCTTATGTCGTGCGCTGTCAGGGGTTCTTCGAGAAGCCTTCTGGAGATGTGGCGATTGTCATGGAGTATATGGATTTGGGAACACTAGACACCTTGTTGAAAAGGAACGGTACGTTTTCAGAAGCCCAACTCGCGGGGGTGGCGCGTCAGGTTTTAAACGGGCTGAGCTATCTCCACGCGCACAAGATTGTTCACCGCGATATTAAGCCCTCTAATCTCTTGGTGAATCAGAAAATGGAAGTGAAAATCGGTGATTTCGGAGTGAGCAAGGTTATGTGCCGCACACTGGACGCGTGCAATTCATACGTCGGGACCTGCGCGTACATGAGCCCGGAGCGATTCGACCCGGATACGTACGGCGGGAATTATAACGGGTATTCGGGCGACATATGGAGCCTGGGTCTGACCCTGTTCGAACTGTACGTGGGTCACTTCCCGTTTCTCCCGGCGGGTCAGAGACCCGATTGGGCGACCCTGATGTGCGCGATTTGCTTCGGAGACCCGCCAAGCTTGCCGGTGCAGGCCTCAAAAGAGTTTCGGAGCTTCATAGATTGTTGCCTGAAGAAAGAGTCGAGCGAGAGGTCGAGTGCCTCTCAGCTCTTGAATCATCCGTTTCTGTCGAAGAAGTTGGGAAAATGTTAG 957 0.558 MALVRDRRHLNLRLPLPEPSERRPRFPLPLPPSSISSNNSVAADIAPNDLEKLQVLGHGNGGTVYKVRHKRTSVVYALKVVHSDSDPMTRRQVRREMDILRRTDSPYVVRCQGFFEKPSGDVAIVMEYMDLGTLDTLLKRNGTFSEAQLAGVARQVLNGLSYLHAHKIVHRDIKPSNLLVNQKMEVKIGDFGVSKVMCRTLDACNSYVGTCAYMSPERFDPDTYGGNYNGYSGDIWSLGLTLFELYVGHFPFLPAGQRPDWATLMCAICFGDPPSLPVQASKEFRSFIDCCLKKESSERSSASQLLNHPFLSKKLGKC 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3842g00012 318 ProSitePatterns Protein kinases ATP-binding region signature. 56 79 IPR017441 GO:0005524
Pral3842g00012 318 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 39 314 - -
Pral3842g00012 318 PIRSF ILK 32 312 - -
Pral3842g00012 318 ProSiteProfiles Protein kinase domain profile. 50 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3842g00012 318 Gene3D Phosphorylase Kinase; domain 1 32 125 - -
Pral3842g00012 318 SUPERFAMILY Protein kinase-like (PK-like) 46 312 IPR011009 -
Pral3842g00012 318 FunFam Mitogen-activated protein kinase kinase 1 32 130 - -
Pral3842g00012 318 SMART serkin_6 50 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3842g00012 318 CDD PKc_MAPKK_plant_like 48 313 - -
Pral3842g00012 318 Gene3D Transferase(Phosphotransferase) domain 1 126 317 - -
Pral3842g00012 318 Pfam Protein kinase domain 51 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3842g00012 318 FunFam Mitogen-activated protein kinase 2 131 317 - -
Pral3842g00012 318 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3842g00012 Pral-Chr3842 62231 63385 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3842g00012 1 315 MAP Kinase Kinase Gene Family AT1G18350 61.709 4.39e-140 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pral3842g00012 Pkinase 2.5e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3842g00012 K20604 - qsu:112004321 488.034