Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3840g00012 ATGAAAGGAAAGCCTGGACCTTCATCATCATCATCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTATGTAATTTGTATAGAAAAATGCAGGCTGCCCAATTCCTGCTTTCTGTCTCACTCCTCCAATAGGTTGAGACACCCACAATGCCATCAATCTGAGCCACACCACTACTACCACTACCAATCTACCACCATTGTCTCCTGCTCATTCCTCACTCTGCTCGGCGTTGCTCGCAGATTCTTCTCAGCAATGCTGTCTCACAAGCTCTCTCTCTTGCTTCCCATTTTCCTCATTTTGCTTCCTTTAGCCAGACCAGATCTGGCTTCTGAGCGAGCTGCTCTGCTTGCTCTCCGTTCTTCAGTGGGTGGCCGAACCCTTCTCTGGAACGTCACCCAACAGAATCACTGCAAATGGGCTGGCGTCCAATGTGACCGTGACCAGATCGTCGAGCTTCATCTTCCCGGTGTTGGGCTTTCCGGCCAGTTACCTAACGGCATTTTTGGTAACCTCACTCATCTCCAGACTCTCAGTCTGCGTTTCAACGCTTTGACTGGAAAACTCCCTTCAGATCTCGCTTCTTGTGTCCACCTACGGAATCTTTACTTGCAGCGAAACTTGTTCTCTGGAGAAATCCCTGCATTCTTGTTCTCTTTACCCGACATGATTCGCCTTAATTTAGCGCACAACAATTTTTCCGGTGCGATTCCACTGGACTTCAACAAGTTAGCAAGGCTGAGGACTCTATATCTAGAGAATAATCAGCTTTCAGGTTCTATTCCCGGGTTGAACCTGGAAAATCTCGAGCAGTTCAATGTGTCAAACAATTTGTTAAACGGCTCGGTACCGGTGAAGTTACAGTCATTTTCTGAAGATTCATTTCTAGGGAATTCACTATGTGGGAAGCCCCTCAAGCTTTGTCCAGGAGAAGGAGCCGCAATATCTCCGTCCGGCGAGATTGAAAACAGCAATAACGGAGGGAAGAAGAAGAAATTGTCTGGTGGGGCCATCGCCGGAATAGTCGTTGGATCTGTGGTGTTGCTCCTGTTGATTGTGTTCGCTTTGATTCTCCTTTGCCGAAAGAAGAGTAATAAGAAGTCGAGCTCCGTCGACATTGCAACTATGAAGCATCCAGAAACGGAAATTCCAGGCGACAAACCCGTTCCAGATGTGGAGAACAATGGTCACAGTAATGGGTATTCGGTAGCTGCAGTGGCTGCAGCAGCCATGACAGGAAACGGCAGAACAGAATCGAACAGCAATGACGGTGTGAAGAAGTTGTCATTCTTTGGTAATTCACCGAAGGTGTTCGATCTGGAAGATTTGCTTAGAGCTTCGGCGGAGGTTCTGGGTAAAGGAACATTTGGAACAGCATATAAGGCGGTTCTGGAATCTGGTCCGGTGGTGGCTGTGAAGAGGTTGAAGGACGTGACAATTTCTGAAAAGGAATTCAAGGAGAAGATTGAATTGGTGGGAGCAATGGATCATGAGAAATTGGTCCCTCTCAGAGCTTATTATTTCAGCAGGGATGAGAAACTTCTCGTCTATGATTACATGCCAACAGGAAGCTTATCTGCACTTTTGCACGGCAACAAAGGGGCGGGTAGGACACCATTGAATTGGGAAATCAGATCAGGAATTGCACTAGGAGCTGCTCAGGGCATCGAGTACCTACATTCACGGGGACCTAATGTTTCTCATGGAAACATAAAATCATCCAACATCCTCCTCACCACATCCTATGATGCCAGAGTGTCTGATTTTGGCCTGGCACATCTTGTTGGACCCTCCTCCACTCCCAATCGGGTCGCCGGCTACCGTGCGCCAGAAGTTACTGATCCTCGCAGAGTTTCTCAGAAGGCGGATGTCTACAGCTTTGGAGTGTTGCTGTTGGAACTTCTGACTGGAAAGGCTCCAACACATTCTCTCTTAAATGAGGAAGGAGTAGACCTCCCTAGATGGGTTCAATCTGTTGTTAGAGAAGAATGGACTTCTGAAGTGTTTGATCTTGAGCTCCTAAGGTATCAGAATGTTGAGGAGGAGATGGTTCAACTATTGCAGCTTGCAGTTGATTGTGCAGCTCAATATCCTGATAAGCGCCCTTCAATGTCTGAGGTGAGACAACGCATAGAAGAGCTACGTCGCTCAAGCTTGAAAGAGGATCAAGACCAAGTTCAGCAACCTGATCTGATCAATATAATGTAG 2202 0.4728 MKGKPGPSSSSSLSLSLSLSVYVICIEKCRLPNSCFLSHSSNRLRHPQCHQSEPHHYYHYQSTTIVSCSFLTLLGVARRFFSAMLSHKLSLLLPIFLILLPLARPDLASERAALLALRSSVGGRTLLWNVTQQNHCKWAGVQCDRDQIVELHLPGVGLSGQLPNGIFGNLTHLQTLSLRFNALTGKLPSDLASCVHLRNLYLQRNLFSGEIPAFLFSLPDMIRLNLAHNNFSGAIPLDFNKLARLRTLYLENNQLSGSIPGLNLENLEQFNVSNNLLNGSVPVKLQSFSEDSFLGNSLCGKPLKLCPGEGAAISPSGEIENSNNGGKKKKLSGGAIAGIVVGSVVLLLLIVFALILLCRKKSNKKSSSVDIATMKHPETEIPGDKPVPDVENNGHSNGYSVAAVAAAAMTGNGRTESNSNDGVKKLSFFGNSPKVFDLEDLLRASAEVLGKGTFGTAYKAVLESGPVVAVKRLKDVTISEKEFKEKIELVGAMDHEKLVPLRAYYFSRDEKLLVYDYMPTGSLSALLHGNKGAGRTPLNWEIRSGIALGAAQGIEYLHSRGPNVSHGNIKSSNILLTTSYDARVSDFGLAHLVGPSSTPNRVAGYRAPEVTDPRRVSQKADVYSFGVLLLELLTGKAPTHSLLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAQYPDKRPSMSEVRQRIEELRRSSLKEDQDQVQQPDLINIM 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3840g00012 733 Gene3D Ribonuclease Inhibitor 222 306 IPR032675 -
Pral3840g00012 733 ProSiteProfiles Leucine-rich repeat profile. 244 266 IPR001611 GO:0005515
Pral3840g00012 733 FunFam pollen receptor-like kinase 1 412 517 - -
Pral3840g00012 733 SUPERFAMILY L domain-like 128 287 - -
Pral3840g00012 733 MobiDBLite consensus disorder prediction 714 733 - -
Pral3840g00012 733 FunFam Probable inactive receptor kinase RLK902 107 263 - -
Pral3840g00012 733 ProSiteProfiles Protein kinase domain profile. 443 712 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3840g00012 733 CDD STKc_IRAK 449 712 - -
Pral3840g00012 733 Gene3D Transferase(Phosphotransferase) domain 1 518 731 - -
Pral3840g00012 733 ProSitePatterns Protein kinases ATP-binding region signature. 449 471 IPR017441 GO:0005524
Pral3840g00012 733 SUPERFAMILY Protein kinase-like (PK-like) 447 713 IPR011009 -
Pral3840g00012 733 Pfam Protein kinase domain 446 707 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3840g00012 733 Pfam Leucine rich repeat N-terminal domain 108 144 IPR013210 -
Pral3840g00012 733 Gene3D Ribonuclease Inhibitor 109 217 IPR032675 -
Pral3840g00012 733 Gene3D Phosphorylase Kinase; domain 1 408 517 - -
Pral3840g00012 733 Pfam Leucine rich repeat 161 206 IPR001611 GO:0005515
Pral3840g00012 733 PANTHER OS05G0588300 PROTEIN 93 718 - -
Pral3840g00012 733 FunFam Probable inactive receptor kinase At1g48480 518 721 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3840g00012 Pral-Chr3840 127136 130429 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3840g00012 106 728 Receptor kinase-like Gene Family AT1G48480 65.512 0.0 811
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral3840g00012 Pkinase 2.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3840g00012 - - qsa:O6P43_008468 934.095