Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3840g00011 ATGCAGTGGTCGTTTTCAAACAAGGTTTCTGCTGTTCCTCAATTGTTGTCCTTTAAGACTTCTCCGGAAGATAGGACAAGAAAGACCACATCATCAGCTGATGCTTTTGACTCTAACCAGAAACCATTCATGGGTGGGATCCAGAAAAGTTTGAGCATGGGAAAACAAGTAGGAAATGAACGTGGAATGACAGTATACCCTATGCAACAAGTTGATACACTTTCAGGCTACCATCAAGAAGCCAGAACATTTTCAGTCTCCAACCAATCAAATCAGAGGAGTCCTGTTCTCCAATGTACTGTCAGTACCAATGTTCAGAACATGGTCAATTCTGCCATAAAACCACACCCTCAAGGAGGAGTCCCTCTGATTGCCCCTGTATCTGTTCTTCCATCAAACGGTTACGCTGTTGGTACCACTGACTTAGGGAACTCGTCGCAACCCTCTGGCAAACCTACTCAGCTGACCATATTCTATGCTGGTTCAGTGTGTGTTTATGAAGACATAGCTCCCGAGAAGGCCCAGGCTATTATGTTGCTGGCTGGACATGGGAGTACTCCAAATCAAAACAAATCAGTGTCAACAGCTCCAGTGCAGACACCAAACTACAAGACTTCTAAAGATGATGGGTTTATTGTAAGCCAATCCTACCATTCACCTTTACCAAGTCCGATTCCCATGTCCTTCCATGTTAGTTCTCAGCCTGTGGGAGGACCTCCTAGCACCAATGAACCAGCAATTGTGAGACCAGTATCATCTTCGGCTGCCCCAAGTTGCAATCTGGAGTCTCCTAGTGTAGCTAGCTCTTCAAAATCTGCAGCGACAAAAGTTGGTTCACCTGTGGACTTGCCTCAGGCGCGCAAAGCATCCTTGGCTCGGTTCTTAGAGAAGCGCAAGGAAAGGGTGACAAGCACATCACCATACCACACAAACAAGAAATCACCAGAATGTGGCAATCAAGGAACGGATAGTATTAGTTTCTCCATCACATCCACCGGTTCTTGTCCCCTACCTGCCATGAACTAG 1026 0.461 MQWSFSNKVSAVPQLLSFKTSPEDRTRKTTSSADAFDSNQKPFMGGIQKSLSMGKQVGNERGMTVYPMQQVDTLSGYHQEARTFSVSNQSNQRSPVLQCTVSTNVQNMVNSAIKPHPQGGVPLIAPVSVLPSNGYAVGTTDLGNSSQPSGKPTQLTIFYAGSVCVYEDIAPEKAQAIMLLAGHGSTPNQNKSVSTAPVQTPNYKTSKDDGFIVSQSYHSPLPSPIPMSFHVSSQPVGGPPSTNEPAIVRPVSSSAAPSCNLESPSVASSSKSAATKVGSPVDLPQARKASLARFLEKRKERVTSTSPYHTNKKSPECGNQGTDSISFSITSTGSCPLPAMN 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3840g00011 341 MobiDBLite consensus disorder prediction 298 341 - -
Pral3840g00011 341 Pfam tify domain 151 182 IPR010399 -
Pral3840g00011 341 MobiDBLite consensus disorder prediction 185 276 - -
Pral3840g00011 341 Pfam Jas motif 284 308 IPR018467 -
Pral3840g00011 341 SMART tify_2 148 183 IPR010399 -
Pral3840g00011 341 ProSiteProfiles Tify domain profile. 148 183 IPR010399 -
Pral3840g00011 341 MobiDBLite consensus disorder prediction 185 281 - -
Pral3840g00011 341 MobiDBLite consensus disorder prediction 20 41 - -
Pral3840g00011 341 MobiDBLite consensus disorder prediction 307 341 - -
Pral3840g00011 341 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 87 318 IPR040390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3840g00011 Pral-Chr3840 81645 84740 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3840g00011 1 314 Tify Gene Family AT3G17860 39.233 1.89e-47 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pral3840g00011 tify 1.2e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3840g00011 K13464 - gmx:100807288 347.051