Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3839g00075 ATGGCGGACTCACCTGCTGAACCTGAACTTCCTCACTTGGACCAAATGCTTGGCCTTCTCAGGATTCACATCAAGCGTGGTATCAATCTCGCTGTTCGTGATGTTCGTAGCAGCGATCCTTACATCGTCGTCAAGATGGGCAAGCAGAAACTCAAGACTCGCGTTATTGAGAAGGATGTTAATCCTGAGTGGAATGAAGAACTTACGCTCTCTGTTGTGGACCCGAAGCTTCCGGTAATATTGACCGTGTATGACCATGATACCTGGAGCCCAGATGACCCAATGGGAGATGCAGAGTTTGATATCATTCCATTTCTAGAAGCCTTGAGGATGCAAGTATCGGACCTCCCCGACGGTACAATTATAACAAGAGTGCAACCAAGCAGGCAAAACTGCCTAGCAGAGGAAAGCTGCATTGTGTTTAACGATGGCAAGATTATCCAAGACATGGCCCTCAGATTGCGACATGTCGAGAGTGGCGAACTCGAAATCCAACTGCAATGGATTGAGCTTCCACGTGCTAAGTAG 528 0.4792 MADSPAEPELPHLDQMLGLLRIHIKRGINLAVRDVRSSDPYIVVKMGKQKLKTRVIEKDVNPEWNEELTLSVVDPKLPVILTVYDHDTWSPDDPMGDAEFDIIPFLEALRMQVSDLPDGTIITRVQPSRQNCLAEESCIVFNDGKIIQDMALRLRHVESGELEIQLQWIELPRAK 175
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pral3839g00075 175 CDD C2_ArfGAP 17 160 - -
Pral3839g00075 175 ProSiteProfiles C2 domain profile. 4 118 IPR000008 -
Pral3839g00075 175 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 15 112 IPR035892 -
Pral3839g00075 175 SMART C2_3c 19 114 IPR000008 -
Pral3839g00075 175 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 15 173 IPR044562 -
Pral3839g00075 175 Pfam C2 domain 18 102 IPR000008 -
Pral3839g00075 175 Gene3D C2 domain 15 174 IPR035892 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pral3839g00075 Pral-Chr3839 830820 833647 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3839g00075 50 175 C2H2 Transcription Factor Family AT1G70790 54.688 6.18e-45 143
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3839g00075 - - rcu:8283127 266.159