Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3839g00057 ATGAGAAGGCCTTGCTCTGAGAAACCAGACTCCCAGAAACGATCTTGGTCCAGGGAAGAAGACCAGAAACTCATTGATTACGTTCAAAAACATGGTGAAGGTTGCTGGCCTTCACTTCCTCAGGCAGCAGGGTTGCGTCGCTGCGGAAAAAGCTGTCGGTTGAGATGGTTAAATTATCTGAAGCCTGACATTAAACGAGGAGACTTCGGAGAAGACGAAGAGGACTTGATCATCAGGCTTCATGCTCTTCTTGGCAACCGGTGGTCACTGATAGCTGGAAGATTACCAGGAAGAACTGATAACGAGGTCAAGAATTACTGGAACTCGCACATAAGAAAGAAGCTTATTCAGATGGGTCATGATCCCAATAATCTTCGCCATCGCTTAATTAAAGGCTCTATATTTATTGGAACTACTGCGAAATCCATTATTATTGACGAAGAAGCTAATCCCCACAAGGAAGATGATGATGATGATGAACCTTCCAATAATAATAATAATCCAGCAGCCAAAAACTTGCAGAATGATGATGATGATGATGATCATCAGGTATTTGATGAGTCATCATCAACAAGCAAGGCCACCAAGCTCAACCTCAACGCTTTTCCAGATTTGAATCTTGATCTCACCCTCACTACTTATCATCACTGCAGTGATCATTGA 663 0.4284 MRRPCSEKPDSQKRSWSREEDQKLIDYVQKHGEGCWPSLPQAAGLRRCGKSCRLRWLNYLKPDIKRGDFGEDEEDLIIRLHALLGNRWSLIAGRLPGRTDNEVKNYWNSHIRKKLIQMGHDPNNLRHRLIKGSIFIGTTAKSIIIDEEANPHKEDDDDDEPSNNNNNPAAKNLQNDDDDDDHQVFDESSSTSKATKLNLNAFPDLNLDLTLTTYHHCSDH 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3839g00057 220 SMART sant 12 62 IPR001005 -
Pral3839g00057 220 SMART sant 65 113 IPR001005 -
Pral3839g00057 220 CDD SANT 71 111 IPR001005 -
Pral3839g00057 220 ProSiteProfiles Myb-like domain profile. 8 60 IPR001005 -
Pral3839g00057 220 CDD SANT 15 60 IPR001005 -
Pral3839g00057 220 FunFam MYB transcription factor 67 129 - -
Pral3839g00057 220 Gene3D - 68 131 - -
Pral3839g00057 220 Pfam Myb-like DNA-binding domain 13 60 IPR001005 -
Pral3839g00057 220 Pfam Myb-like DNA-binding domain 66 110 IPR001005 -
Pral3839g00057 220 SUPERFAMILY Homeodomain-like 11 107 IPR009057 -
Pral3839g00057 220 MobiDBLite consensus disorder prediction 150 192 - -
Pral3839g00057 220 ProSiteProfiles Myb-like domain profile. 61 111 IPR001005 -
Pral3839g00057 220 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 61 115 IPR017930 -
Pral3839g00057 220 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 186 - -
Pral3839g00057 220 Gene3D - 13 65 - -
Pral3839g00057 220 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 60 IPR017930 -
Pral3839g00057 220 FunFam MYB-related transcription factor 12 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3839g00057 Pral-Chr3839 643268 645530 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3839g00057 2 211 MYB Transcription Factor Family AT4G09460 47.619 9.29e-66 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral3839g00057 Myb_DNA-binding 9.8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3839g00057 K09422 - zju:125422401 248.054