Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3839g00050 ATGGTTTCAGGTCCAAAGCGTGAAGTTAAGGCACAGCCTGCCCATTCTCAGCCTAAAGATAAGGAAATTCCTTCAGTGGAAGATCAAGACGATCTGATAACAGATGAGAAAAACCATTTGAATGTTGTGTTCATTGGTCATGTTGATGCTGGTAAGTCTACGACTGGAGGCCAGATTCTTTTCCTAAGTGGTCAGGTTGATGAACGTACTATCCAAAAATATGAAAAAGAAGCAAAGGACAAAAGTAGAGAAAGTTGGTATATGGCTTATATAATGGACACTAATGAAGAGGAGAGGGTAAAGGGCAAAACGGTTGAAGTGGGAAGAGCGCATTTTGAGACAGAAAAAAGAAGGTTTACAATTTTGGATGCACCTGGTCACAAAAGCTATGTCCCCAACATGATCAGTGGTGCAACTCAAGCTGATATTGGAGTTTTGGTAATTTCTGCTCGAAAGGGAGAATTTGAAACTGGATATGAAAGAGGTGGACAGACCCGTGAACATGTCCAGCTTGCAAAAACATTGGGTGTGTCTAAGCTGATTGTTGTTATTAATAAAATGGACGACCCTACAGTGAAGTGGTCAAAGGAAAGGTATGATGAAATTGAGTCAAAGATGATTCCTTTTCTTAAGTCGTCGGGCTACAATGTGAAGAAAGATGTCCTGTTTTTACCCTTATCTGGGCTGACTGGTGCAAACATACAAACGAGAGTGGATAAAAGCACTTGTGCTTGGTGGGATGGTCCCTGCCTATTTGAAGCCCTTGATGGTGTTGAAAGTCCGCCCCGAGACCCCAAAGGCCCTTTCAGGATGCCTATTCTTGACAAATTCAAAGACATGGGAACTGTCGTTATGGGAAAAGTGGAATCTGGTACTGTACGTGAGGGGGATTCCTTGTTGGTTATGCCAAATAAGGATCACGTAAAAGTTGTTGCTGTATTCATTGATGAAGATAGGGTCAAACGTGCTGGACCTGGTGAGAATTTACGAGTTAGAATATCTGGTGTTGAAGAAGAAGACATACTAGGCGGGTTCATTCTGTCTAGCGTTGAAAATCCAATACCAGCTGTTACTGAGTTTGTGGCTCAGCTGCAGATCCTTGAATTGGTGGACAATGCTATTTTTACTGCTGGATACAAGGCTGTTTTGCACATCCACTGTGTTGTTGAAGAATGTGAGATTGTTGAGCTCCTACAACAAATTGATCCAAAGTTGAAGAAACCTATGAAAAAGAAACCTCTCTTTGTGAAGAATGGTGCTGTTGTTGTCTGCCGAGTTCAGGTTAACAATTCGATATGCGTTGAAAAATTTGCTGATTTCCCCCAACTTGGAAGGTTTACTCTTCGCACGGAAGGAAAAACTGTTGCAGTGGGAAAAGTCACTGGTTTTTAA 1392 0.4188 MVSGPKREVKAQPAHSQPKDKEIPSVEDQDDLITDEKNHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETEKRRFTILDAPGHKSYVPNMISGATQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLIVVINKMDDPTVKWSKERYDEIESKMIPFLKSSGYNVKKDVLFLPLSGLTGANIQTRVDKSTCAWWDGPCLFEALDGVESPPRDPKGPFRMPILDKFKDMGTVVMGKVESGTVREGDSLLVMPNKDHVKVVAVFIDEDRVKRAGPGENLRVRISGVEEEDILGGFILSSVENPIPAVTEFVAQLQILELVDNAIFTAGYKAVLHIHCVVEECEIVELLQQIDPKLKKPMKKKPLFVKNGAVVVCRVQVNNSICVEKFADFPQLGRFTLRTEGKTVAVGKVTGF 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3839g00050 463 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 93 108 IPR031157 -
Pral3839g00050 463 CDD eRF3_C_III 355 461 - -
Pral3839g00050 463 CDD eRF3_II 268 349 - -
Pral3839g00050 463 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 357 462 IPR009001 -
Pral3839g00050 463 Pfam Elongation factor Tu GTP binding domain 37 250 IPR000795 GO:0003924|GO:0005525
Pral3839g00050 463 Pfam Elongation factor Tu C-terminal domain 354 461 IPR004160 -
Pral3839g00050 463 Gene3D - 20 261 IPR027417 -
Pral3839g00050 463 Gene3D Translation factors 266 351 - -
Pral3839g00050 463 SUPERFAMILY Translation proteins 261 353 IPR009000 -
Pral3839g00050 463 MobiDBLite consensus disorder prediction 1 26 - -
Pral3839g00050 463 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 17 261 - -
Pral3839g00050 463 Pfam Elongation factor Tu domain 2 281 347 IPR004161 GO:0005525
Pral3839g00050 463 Gene3D Translation factors 356 463 - -
Pral3839g00050 463 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 265 351 - -
Pral3839g00050 463 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 37 263 IPR000795 GO:0003924|GO:0005525
Pral3839g00050 463 MobiDBLite consensus disorder prediction 12 26 - -
Pral3839g00050 463 PANTHER TRANSLATION FACTOR 28 461 - -
Pral3839g00050 463 CDD EF1_alpha 41 262 - -
Pral3839g00050 463 FunFam Putative translation elongation/initiation factor family protein 355 463 - -
Pral3839g00050 463 PRINTS GTP-binding elongation factor signature 136 147 IPR000795 GO:0003924|GO:0005525
Pral3839g00050 463 PRINTS GTP-binding elongation factor signature 120 130 IPR000795 GO:0003924|GO:0005525
Pral3839g00050 463 PRINTS GTP-binding elongation factor signature 180 189 IPR000795 GO:0003924|GO:0005525
Pral3839g00050 463 PRINTS GTP-binding elongation factor signature 41 54 IPR000795 GO:0003924|GO:0005525
Pral3839g00050 463 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 31 272 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3839g00050 Pral-Chr3839 545003 556159 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3839g00050 2 461 Eukaryotic Initiation Factors Gene Family AT5G10630 36.559 4.04e-99 310
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3839g00050 K03267 - gmx:100793653 803.512