Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3839g00047 ATGGATATTGAGGAGGACATCCGTTCTCTACAGCTTGATTCAACAGAAGACAATAATGGTGTTGTTAATCCGGAGGAGGCAAAGCCAGAAGTTGAGAATTCTGCTAAGATGGATGAAGGTCCAAAGCGTGAAGTTAAGGCACAGCCTGCCCATTCTCAGCCTAAAGATAAGGAAATTCCTTCAGTGGAAGATCAAGACGATCTGATAACAGATGAGAAAAACCATTTGAATGTTGTGTTCATTGGTCATGTTGATGCTGGTAAGTCTACGACTGGAGGCCAGATTCTTTTCCTAAGTGGTCAGGTTGATGAACGTACTATCCAAAAATATGAAAAAGAAGCAAAGGACAAAAGTAGAGAAAGTTGGTATATGGCTTATATAATGGACACTAATGAAGAGGAGAGGGTAAAGGGCAAAACGGTTGAAGTGGGAAGAGCGCATTTTGAGACAGAAAAAAGAAGGTTTACAATTTTGGATGCACCTGGTCACAAAAGCTATGTCCCCAACATGATCAGTGGTGCAACTCAAGCTGATATTGGAGTTTTGGTAATTTCTGCTCGAAAGGGAGAATTTGAAACTGGATATGAAAGAGGTGGACAGACCCGTGAACATGTCCAGCTTGCAAAAACATTGGGTGTGTCTAAGCTGATTGTTGTTATTAATAAAATGGACGACCCTACAGTGAAGTGGTCAAAGGAAAGGTATGATGAAATTGAGTCAAAGATGATTCCTTTTCTTAAGTCGTCGGGCTACAATGTGAAGAAAGATGTCCTGTTTTTACCCTTATCTGGGCTGACTGGTGCAAACATACAAACGAGAGTGGATAAAAGCACTTGTGCTTGGTGGGATGGTCCCTGCCTATTTGAAGCCCTTGATGGTGTTGAAAGTCCGCCCCGAGACCCCAAAGGCCCTTTCAGGATGCCTATTCTTGACAAATTCAAAGACATGGGAACTGTCGTTATGGGAAAAGTGGAATCTGGTACTGTACGTGAGGGGGATTCCTTGTTGGTTATGCCAAATAAGGATCACGTAAAAGTTGTTGCTGTATTCATTGATGAAGATAGGGTCAAACGTGCTGGACCTGGTGAGAATTTACGAGTTAGAATATCTGGTGTTGAAGAAGAAGACATACTAGGCGGGTTCATTCTGTCTAGCGTTGAAAATCCAATACCAGCTGTTACTGAGTTTGTGGCTCAGCTGCAGATCCTTGAATTGGTGGACAATGCTATTTTTACTGCTGGATACAAGGCTGTTTTGCACATCCACTGTGTTGTTGAAGAATGTGAGATTGTTGAGCTCCTACAACAAATTGATCCAAAGTTGAAGAAACCTATGAAAAAGAAACCTCTCTTTGTGAAGAATGGTGCTGTTGTTGTCTGCCGAGTTCAGGTTAACAATTCGATATGCGTTGAAAAATTTGCTGATTTCCCCCAACTTGGAAGGTTTACTCTTCGCACGGAAGGAAAAACTGTTGCAGTGGGAAAAGTCACTGGTTTTTAA 1500 0.4193 MDIEEDIRSLQLDSTEDNNGVVNPEEAKPEVENSAKMDEGPKREVKAQPAHSQPKDKEIPSVEDQDDLITDEKNHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETEKRRFTILDAPGHKSYVPNMISGATQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLIVVINKMDDPTVKWSKERYDEIESKMIPFLKSSGYNVKKDVLFLPLSGLTGANIQTRVDKSTCAWWDGPCLFEALDGVESPPRDPKGPFRMPILDKFKDMGTVVMGKVESGTVREGDSLLVMPNKDHVKVVAVFIDEDRVKRAGPGENLRVRISGVEEEDILGGFILSSVENPIPAVTEFVAQLQILELVDNAIFTAGYKAVLHIHCVVEECEIVELLQQIDPKLKKPMKKKPLFVKNGAVVVCRVQVNNSICVEKFADFPQLGRFTLRTEGKTVAVGKVTGF 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3839g00047 499 CDD eRF3_C_III 391 497 - -
Pral3839g00047 499 SUPERFAMILY Translation proteins 297 389 IPR009000 -
Pral3839g00047 499 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 129 144 IPR031157 -
Pral3839g00047 499 CDD eRF3_II 304 385 - -
Pral3839g00047 499 PRINTS GTP-binding elongation factor signature 172 183 IPR000795 GO:0003924|GO:0005525
Pral3839g00047 499 PRINTS GTP-binding elongation factor signature 216 225 IPR000795 GO:0003924|GO:0005525
Pral3839g00047 499 PRINTS GTP-binding elongation factor signature 156 166 IPR000795 GO:0003924|GO:0005525
Pral3839g00047 499 PRINTS GTP-binding elongation factor signature 77 90 IPR000795 GO:0003924|GO:0005525
Pral3839g00047 499 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 53 297 - -
Pral3839g00047 499 Gene3D Translation factors 302 387 - -
Pral3839g00047 499 PANTHER TRANSLATION FACTOR 64 497 - -
Pral3839g00047 499 Gene3D Translation factors 392 499 - -
Pral3839g00047 499 MobiDBLite consensus disorder prediction 29 62 - -
Pral3839g00047 499 Pfam Elongation factor Tu GTP binding domain 73 280 IPR000795 GO:0003924|GO:0005525
Pral3839g00047 499 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 73 299 IPR000795 GO:0003924|GO:0005525
Pral3839g00047 499 FunFam Putative translation elongation/initiation factor family protein 391 499 - -
Pral3839g00047 499 Pfam Elongation factor Tu C-terminal domain 390 497 IPR004160 -
Pral3839g00047 499 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 301 387 - -
Pral3839g00047 499 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 393 498 IPR009001 -
Pral3839g00047 499 Pfam Elongation factor Tu domain 2 317 383 IPR004161 GO:0005525
Pral3839g00047 499 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 67 308 IPR027417 -
Pral3839g00047 499 CDD EF1_alpha 77 298 - -
Pral3839g00047 499 MobiDBLite consensus disorder prediction 1 62 - -
Pral3839g00047 499 Gene3D - 56 297 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3839g00047 Pral-Chr3839 545003 556160 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3839g00047 1 497 Eukaryotic Initiation Factors Gene Family AT5G10630 35.785 8.08e-102 318
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3839g00047 K03267 - gmx:100793653 862.448