Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3839g00046 ATGGATATTGAGGAGGACATCCGTTCTCTACAGCTTGATTCAACAGATTTAACAGAAGACAATAATGGTGTTGTTAATCCGGAGGAGGCAAAGCCAGAAGTTGAGAATTCTGCTAAGATGGATGAAGTTTCAGGTCCAAAGCGTGAAGTTAAGGCACAGCCTGCCCATTCTCAGCCTAAAGATAAGGAAATTCCTTCAGTGGAAGATCAAGACGATCTGATAACAGATGAGAAAAACCATTTGAATGTTGTGTTCATTGGTCATGTTGATGCTGGTAAGTCTACGACTGGAGGCCAGATTCTTTTCCTAAGTGGTCAGGTTGATGAACGTACTATCCAAAAATATGAAAAAGAAGCAAAGGACAAAAGTAGAGAAAGTTGGTATATGGCTTATATAATGGACACTAATGAAGAGGAGAGGGTAAAGGGCAAAACGGTTGAAGTGGGAAGAGCGCATTTTGAGACAGAAAAAAGAAGGTTTACAATTTTGGATGCACCTGGTCACAAAAGCTATGTCCCCAACATGATCAGTGGTGCAACTCAAGCTGATATTGGAGTTTTGGTAATTTCTGCTCGAAAGGGAGAATTTGAAACTGGATATGAAAGAGGTGGACAGACCCGTGAACATGTCCAGCTTGCAAAAACATTGGGTGTGTCTAAGCTGATTGTTGTTATTAATAAAATGGACGACCCTACAGTGAAGTGGTCAAAGGAAAGGTATGATGAAATTGAGTCAAAGATGATTCCTTTTCTTAAGTCGTCGGGCTACAATGTGAAGAAAGATGTCCTGTTTTTACCCTTATCTGGGCTGACTGGTGCAAACATACAAACGAGAGTGGATAAAAGCACTTGTGCTTGGTGGGATGGTCCCTGCCTATTTGAAGCCCTTGATGGTGTTGAAAGTCCGCCCCGAGACCCCAAAGGCCCTTTCAGGATGCCTATTCTTGACAAATTCAAAGACATGGGAACTGTCGTTATGGGAAAAGTGGAATCTGGTACTGTACGTGAGGGGGATTCCTTGTTGGTTATGCCAAATAAGGATCACGTAAAAGTTGTTGCTGTATTCATTGATGAAGATAGGGTCAAACGTGCTGGACCTGGTGAGAATTTACGAGTTAGAATATCTGGTGTTGAAGAAGAAGACATACTAGGCGGGTTCATTCTGTCTAGCGTTGAAAATCCAATACCAGCTGTTACTGAGTTTGTGGCTCAGCTGCAGATCCTTGAATTGGTGGACAATGCTATTTTTACTGCTGGATACAAGGCTGTTTTGCACATCCACTGTGTTGTTGAAGAATGTGAGATTGTTGAGCTCCTACAACAAATTGATCCAAAGTTGAAGAAACCTATGAAAAAGAAACCTCTCTTTGTGAAGAATGGTGCTGTTGTTGTCTGCCGAGTTCAGGTTAACAATTCGATATGCGTTGAAAAATTTGCTGATTTCCCCCAACTTGGAAGGTTTACTCTTCGCACGGAAGGAAAAACTGTTGCAGTGGGAAAAGTCACTGGTTTTTAA 1515 0.4178 MDIEEDIRSLQLDSTDLTEDNNGVVNPEEAKPEVENSAKMDEVSGPKREVKAQPAHSQPKDKEIPSVEDQDDLITDEKNHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETEKRRFTILDAPGHKSYVPNMISGATQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLIVVINKMDDPTVKWSKERYDEIESKMIPFLKSSGYNVKKDVLFLPLSGLTGANIQTRVDKSTCAWWDGPCLFEALDGVESPPRDPKGPFRMPILDKFKDMGTVVMGKVESGTVREGDSLLVMPNKDHVKVVAVFIDEDRVKRAGPGENLRVRISGVEEEDILGGFILSSVENPIPAVTEFVAQLQILELVDNAIFTAGYKAVLHIHCVVEECEIVELLQQIDPKLKKPMKKKPLFVKNGAVVVCRVQVNNSICVEKFADFPQLGRFTLRTEGKTVAVGKVTGF 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3839g00046 504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 72 313 IPR027417 -
Pral3839g00046 504 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 134 149 IPR031157 -
Pral3839g00046 504 PRINTS GTP-binding elongation factor signature 177 188 IPR000795 GO:0003924|GO:0005525
Pral3839g00046 504 PRINTS GTP-binding elongation factor signature 221 230 IPR000795 GO:0003924|GO:0005525
Pral3839g00046 504 PRINTS GTP-binding elongation factor signature 82 95 IPR000795 GO:0003924|GO:0005525
Pral3839g00046 504 PRINTS GTP-binding elongation factor signature 161 171 IPR000795 GO:0003924|GO:0005525
Pral3839g00046 504 FunFam Putative translation elongation/initiation factor family protein 396 504 - -
Pral3839g00046 504 MobiDBLite consensus disorder prediction 1 66 - -
Pral3839g00046 504 Pfam Elongation factor Tu C-terminal domain 395 502 IPR004160 -
Pral3839g00046 504 Pfam Elongation factor Tu domain 2 322 388 IPR004161 GO:0005525
Pral3839g00046 504 Gene3D Translation factors 307 392 - -
Pral3839g00046 504 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 78 304 IPR000795 GO:0003924|GO:0005525
Pral3839g00046 504 PANTHER TRANSLATION FACTOR 69 502 - -
Pral3839g00046 504 CDD eRF3_II 309 390 - -
Pral3839g00046 504 MobiDBLite consensus disorder prediction 32 66 - -
Pral3839g00046 504 CDD EF1_alpha 82 303 - -
Pral3839g00046 504 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 58 302 - -
Pral3839g00046 504 SUPERFAMILY Translation proteins 302 394 IPR009000 -
Pral3839g00046 504 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 306 392 - -
Pral3839g00046 504 Gene3D - 61 302 IPR027417 -
Pral3839g00046 504 CDD eRF3_C_III 396 502 - -
Pral3839g00046 504 Pfam Elongation factor Tu GTP binding domain 78 285 IPR000795 GO:0003924|GO:0005525
Pral3839g00046 504 Gene3D Translation factors 397 504 - -
Pral3839g00046 504 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 398 503 IPR009001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3839g00046 Pral-Chr3839 545003 556161 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3839g00046 18 502 Eukaryotic Initiation Factors Gene Family AT5G10630 36.122 8.55e-101 315
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3839g00046 K03267 - gmx:100793653 852.047