Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3839g00045 ATGGATATTGAGGAGGACATCCGTTCTCTACAGCTTGATTCAACAGATTTAACAGAAGACAATAATGGTGTTGTTAATCCGGAGGAGGCAAAGCCAGAAGTTGAGAATTCTGCTAAGATGGATGAAGGTCCAAAGCGTGAAGTTAAGGCACAGCCTGCCCATTCTCAGCCTAAAGATAAGGAAATTCCTTCAGTGGAAGATCAAGACGATCTGATAACAGATGAGAAAAACCATTTGAATGTTGTGTTCATTGGTCATGTTGATGCTGGTAAGTCTACGACTGGAGGCCAGATTCTTTTCCTAAGTGGTCAGGTTGATGAACGTACTATCCAAAAATATGAAAAAGAAGCAAAGGACAAAAGTAGAGAAAGTTGGTATATGGCTTATATAATGGACACTAATGAAGAGGAGAGGGTAAAGGGCAAAACGGTTGAAGTGGGAAGAGCGCATTTTGAGACAGAAAAAAGAAGGTTTACAATTTTGGATGCACCTGGTCACAAAAGCTATGTCCCCAACATGATCAGTGGTGCAACTCAAGCTGATATTGGAGTTTTGGTAATTTCTGCTCGAAAGGGAGAATTTGAAACTGGATATGAAAGAGGTGGACAGACCCGTGAACATGTCCAGCTTGCAAAAACATTGGGTGTGTCTAAGCTGATTGTTGTTATTAATAAAATGGACGACCCTACAGTGAAGTGGTCAAAGGAAAGGTATGATGAAATTGAGTCAAAGATGATTCCTTTTCTTAAGTCGTCGGGCTACAATGTGAAGAAAGATGTCCTGTTTTTACCCTTATCTGGGCTGACTGGTGCAAACATACAAACGAGAGTGGATAAAAGCACTTGTGCTTGGTGGGATGGTCCCTGCCTATTTGAAGCCCTTGATGGTGTTGAAAGTCCGCCCCGAGACCCCAAAGGCCCTTTCAGGATGCCTATTCTTGACAAATTCAAAGACATGGGAACTGTCGTTATGGGAAAAGTGGAATCTGGTACTGTACGTGAGGGGGATTCCTTGTTGGTTATGCCAAATAAGGATCACGTAAAAGTTGTTGCTGTATTCATTGATGAAGATAGGGTCAAACGTGCTGGACCTGGTGAGAATTTACGAGTTAGAATATCTGGTGTTGAAGAAGAAGACATACTAGGCGGGTTCATTCTGTCTAGCGTTGAAAATCCAATACCAGCTGTTACTGAGTTTGTGGCTCAGCTGCAGATCCTTGAATTGGTGGACAATGCTATTTTTACTGCTGGATACAAGGCTGTTTTGCACATCCACTGTGTTGTTGAAGAATGTGAGATTGTTGAGCTCCTACAACAAATTGATCCAAAGTTGAAGAAACCTATGAAAAAGAAACCTCTCTTTGTGAAGAATGGTGCTGTTGTTGTCTGCCGAGTTCAGGTTAACAATTCGATATGCGTTGAAAAATTTGCTGATTTCCCCCAACTTGGAAGGTTTACTCTTCGCACGGAAGGAAAAACTGTTGCAGTGGGAAAAGTCACTGGTTTTTAA 1509 0.4182 MDIEEDIRSLQLDSTDLTEDNNGVVNPEEAKPEVENSAKMDEGPKREVKAQPAHSQPKDKEIPSVEDQDDLITDEKNHLNVVFIGHVDAGKSTTGGQILFLSGQVDERTIQKYEKEAKDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETEKRRFTILDAPGHKSYVPNMISGATQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKLIVVINKMDDPTVKWSKERYDEIESKMIPFLKSSGYNVKKDVLFLPLSGLTGANIQTRVDKSTCAWWDGPCLFEALDGVESPPRDPKGPFRMPILDKFKDMGTVVMGKVESGTVREGDSLLVMPNKDHVKVVAVFIDEDRVKRAGPGENLRVRISGVEEEDILGGFILSSVENPIPAVTEFVAQLQILELVDNAIFTAGYKAVLHIHCVVEECEIVELLQQIDPKLKKPMKKKPLFVKNGAVVVCRVQVNNSICVEKFADFPQLGRFTLRTEGKTVAVGKVTGF 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3839g00045 502 CDD eRF3_II 307 388 - -
Pral3839g00045 502 PANTHER TRANSLATION FACTOR 67 500 - -
Pral3839g00045 502 SUPERFAMILY EF-Tu/eEF-1alpha/eIF2-gamma C-terminal domain 396 501 IPR009001 -
Pral3839g00045 502 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 304 390 - -
Pral3839g00045 502 CDD EF1_alpha 80 301 - -
Pral3839g00045 502 Gene3D Translation factors 305 390 - -
Pral3839g00045 502 MobiDBLite consensus disorder prediction 32 65 - -
Pral3839g00045 502 Pfam Elongation factor Tu C-terminal domain 393 500 IPR004160 -
Pral3839g00045 502 FunFam Eukaryotic peptide chain release factor GTP-binding subunit ERF3A 56 300 - -
Pral3839g00045 502 CDD eRF3_C_III 394 500 - -
Pral3839g00045 502 PRINTS GTP-binding elongation factor signature 219 228 IPR000795 GO:0003924|GO:0005525
Pral3839g00045 502 PRINTS GTP-binding elongation factor signature 159 169 IPR000795 GO:0003924|GO:0005525
Pral3839g00045 502 PRINTS GTP-binding elongation factor signature 80 93 IPR000795 GO:0003924|GO:0005525
Pral3839g00045 502 PRINTS GTP-binding elongation factor signature 175 186 IPR000795 GO:0003924|GO:0005525
Pral3839g00045 502 ProSitePatterns Translational (tr)-type guanine nucleotide-binding (G) domain signature. 132 147 IPR031157 -
Pral3839g00045 502 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 76 302 IPR000795 GO:0003924|GO:0005525
Pral3839g00045 502 Gene3D Translation factors 395 502 - -
Pral3839g00045 502 SUPERFAMILY Translation proteins 300 392 IPR009000 -
Pral3839g00045 502 MobiDBLite consensus disorder prediction 1 65 - -
Pral3839g00045 502 Pfam Elongation factor Tu domain 2 320 386 IPR004161 GO:0005525
Pral3839g00045 502 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 70 311 IPR027417 -
Pral3839g00045 502 FunFam Putative translation elongation/initiation factor family protein 394 502 - -
Pral3839g00045 502 Pfam Elongation factor Tu GTP binding domain 76 283 IPR000795 GO:0003924|GO:0005525
Pral3839g00045 502 Gene3D - 59 300 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3839g00045 Pral-Chr3839 545003 556161 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3839g00045 18 500 Eukaryotic Initiation Factors Gene Family AT5G10630 36.196 1.99e-100 314
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3839g00045 K03267 - gmx:100793653 857.055