Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3839g00042 ATGGGGGAAGTGAGGCTGATTGCGACTCCTCAGAGCTTTCCCTGTGCCAGAATCGAATGGGTCTTGAAGATGAAGGGCGTGGAATACGAATACATCAAAGAAAATCTGCTCAATAAAAGCGACCTACTTCTTCAGTCCAATCCTGTACACAAGAAGGTACCTGTTCTTCTCCATAACGGCCTACCTATTGCTGAATCCCTCGTCATCCTCGAGTACATCGACGAGACTTGGAAGCAAAACCCTCTGCTTCCACAGGACCCTTGCGATCGAGCCCATGCTCGTTTCTGGGCAGGATTTATCGATGAGAAGTGTGTGGTGGGTGTATGGAGAGCTGGGGTAGCACAAGGAGAAGGAAAGGGGAAAGCCATAGAGTCAGCTGTGGAATCACTTGCAGTTCTGGAAAAGCAGATTGAAGGGAAGAAGTACTTTGGGGGAGAAGAGATTGGGTATTTGGACATAGTAGCAGGTTGGATACCTCATTGGCTGAATGTTGTGGAACAAGTTGGAGAGATGGAATTGCTCACTGCTGAGAGGTTCCCACATCTTCATCAATGGAGCCTCAACTTGCAGCAAACTTCACCTTTCAACGATTGCTTACCTCCCAGAAATTCTGTCGTTGACTACTACAATATCGCCTTCAACCGCGTGCGTTCCGTGTCAGCCAATAAATAA 672 0.4777 MGEVRLIATPQSFPCARIEWVLKMKGVEYEYIKENLLNKSDLLLQSNPVHKKVPVLLHNGLPIAESLVILEYIDETWKQNPLLPQDPCDRAHARFWAGFIDEKCVVGVWRAGVAQGEGKGKAIESAVESLAVLEKQIEGKKYFGGEEIGYLDIVAGWIPHWLNVVEQVGEMELLTAERFPHLHQWSLNLQQTSPFNDCLPPRNSVVDYYNIAFNRVRSVSANK 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3839g00042 223 Pfam Glutathione S-transferase, C-terminal domain 122 185 - -
Pral3839g00042 223 SUPERFAMILY Thioredoxin-like 4 104 IPR036249 -
Pral3839g00042 223 CDD GST_N_Tau 4 77 - -
Pral3839g00042 223 Pfam Glutathione S-transferase, N-terminal domain 16 75 IPR004045 -
Pral3839g00042 223 SUPERFAMILY GST C-terminal domain-like 75 215 IPR036282 -
Pral3839g00042 223 CDD GST_C_Tau 87 210 IPR045074 GO:0004364|GO:0006749
Pral3839g00042 223 Gene3D - 83 219 - -
Pral3839g00042 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 86 208 IPR010987 -
Pral3839g00042 223 SFLD Main.3: Omega- and Tau-like 2 219 IPR045073 -
Pral3839g00042 223 Gene3D Glutaredoxin 1 82 - -
Pral3839g00042 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 81 IPR004045 -
Pral3839g00042 223 FunFam Tau class glutathione S-transferase 1 85 - -
Pral3839g00042 223 SFLD Main (cytGST) 2 219 - -
Pral3839g00042 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 12 204 IPR045073 -
Pral3839g00042 223 FunFam Tau class glutathione S-transferase 83 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3839g00042 Pral-Chr3839 520139 521673 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3839g00042 3 221 Glutathione S-transferase Gene Family AT2G29420 42.466 2.03e-64 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3839g00042 K00799 - gmx:547587 331.257