Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3839g00031 ATGATGAGCGAAAGCTCCCAGTCTCAGTCTGCCACTGGAAATGGAAGTCTAAATGTGGAGCCTCAGGATCCAAAATCAAACCCTAATCACAAGCGGGAGGCTTATTCAGAAGCTAATGATCTGACAGCAAAGAAATTGAGAACTGAAGCTTTCACTGTGCGTGATGCTTTCGGCAGTGAAGAAGGGAACTCAGGAGCTGTTTCAGGTCAACAGAACGCCGAGGAACTAAAAGAAGGGGACTCAGGAGCTGTTTCAGGTCAACAGAATGCCGAAGAACTAAAAGAAGGGGACTCAGGAGCTGTCAAAGGTCAACAGAATGCCAAGGAACTAACGTTCGAGATTGAGGCAGACGCAGCTGAGGATAAGGGGTCTAGGCATACAATGGAAGATGCCTGGGTAGTGCTTTTGGACGCCAGTTTAGATCACCCTGGAAAACTGAGGTGTGCACACTTTGCAATCTATGATGGACATGGGGGCCGGTTAGCTGCAGAATATGCTCAAAAGCATTTGCATGAAAATGTTCTTTCAACAGGATTACCACGTGAGTTGTTAGATGTAAAGGTAGCTAAAAGAGCAATACTCGAAGGTTTTCGCAAAACTGATGAGTCCCTTCTTCAAGAAAGTGCCGCAGGGGGATGGCAGGATGGTGCTACAGCTGTATGTGTTTGGATATTGGGACAAAAAGTTTTTGTTGCAAATATAGGAGATGCCAAAGCAGTTTTAGCTCGATCAGCTATAACTGATGGTTCCCAAAATCACTCAGATGGAGTACCTGCATTGAAGGCCATTGTTTTGACAAGGGAACACAAGGCAATCTACCCACAGGAGCGGGCTCGTATTCAGAAGGCTGGTGTTGTGAGCTCTAATGGACGATTGCAAGGGCGTCTAGAAGTTTCCAGGGCATTTGGTGATCGCCAGTTCAAGAAGGTGGGTGTTATTGCAACCCCGGATATCCATTCTTTTGACCTTACTGATAGAGAGCATTTTGTCATCCTTGGCTGTGATGGCCTATGGGGGGTATTTGGTCCCAGTGATGCAGTTGTTTTTGTTCAGAAACTATTGAGTGAGGGGTTGCCTGTCACAACTGTGACCCGCCATCTTGTAAGAGAAGCTGTTCGTGAGCGGCGCTGTAAGGATAACTGCACTGCAATTATTATTGTATTCAAGCGCAAGTAG 1176 0.4643 MMSESSQSQSATGNGSLNVEPQDPKSNPNHKREAYSEANDLTAKKLRTEAFTVRDAFGSEEGNSGAVSGQQNAEELKEGDSGAVSGQQNAEELKEGDSGAVKGQQNAKELTFEIEADAAEDKGSRHTMEDAWVVLLDASLDHPGKLRCAHFAIYDGHGGRLAAEYAQKHLHENVLSTGLPRELLDVKVAKRAILEGFRKTDESLLQESAAGGWQDGATAVCVWILGQKVFVANIGDAKAVLARSAITDGSQNHSDGVPALKAIVLTREHKAIYPQERARIQKAGGXVSSNGRLQGRLEVSRAFGDRQFKKVGVIATPDIHSFDLTDREHFVILGCDGLWGVFGPSDAVVFVQKLLSEGLPVTTVTRHLVREAVRERRCKDNCTAIIIVFKRK 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3839g00031 392 CDD PP2Cc 121 389 IPR001932 -
Pral3839g00031 392 PANTHER PROTEIN PHOSPHATASE 2C 84 387 IPR015655 GO:0004722|GO:0006470
Pral3839g00031 392 MobiDBLite consensus disorder prediction 25 51 - -
Pral3839g00031 392 Pfam Protein phosphatase 2C 119 377 IPR001932 -
Pral3839g00031 392 MobiDBLite consensus disorder prediction 1 107 - -
Pral3839g00031 392 SMART PP2C_4 105 387 IPR001932 -
Pral3839g00031 392 Gene3D - 98 391 IPR036457 -
Pral3839g00031 392 FunFam Probable protein phosphatase 2C 67 102 391 - -
Pral3839g00031 392 ProSiteProfiles PPM-type phosphatase domain profile. 115 389 IPR001932 -
Pral3839g00031 392 SUPERFAMILY PP2C-like 114 390 IPR036457 -
Pral3839g00031 392 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3839g00031 Pral-Chr3839 399695 406209 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3839g00031 55 341 PP2C-type Phosphatase Gene Family AT1G18030 70.035 7.97e-140 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3839g00031 K17500 - qsa:O6P43_008526 549.666