Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3839g00009 ATGTCAAAACCCCTGTATTTCATTGCCGCTCTCTCCTTCTTCTGCCTCATGCGCAGTATTGTGGAAGTATCTTCTTCTTCAATATGTTCCCCCTCTGCTGGTTGCGGTAATGGAGTTCCCATTCGGTATCCTTTCTGGGTGAACAACAATTCCGCCCAAGAATACTGCGGTTACCCTCATTTTGGTCTCAAATGCTCCGAACATGGCCGACCCATCATCAGTCTTCCAAACGACAAATACTATGTCACAGATATAAACTACGATGATGATACAGTAACACTTGTGGACACGGATGTGGTGGACCAAACCTGCCCCAGAGCACGCTACAATGTTAGCTTAGAAAACCTCCCACTGAGTGTTAATAATCAGCTGAATATGAACCTGACTTTCTACTTCAATTGCAGCGTATCTAATAAAGTCAATAATCTTCCTTCCGACCCCATACGGTGCTTGAAAAATGAAGGATCGAAGCAGTCATATGTCGAGACGACGCCGTGGGACACATATGGGCTGAATATAGAATGTGCGGAGAAGGTGGTGGTAGTAGTGGCGAAGCAGGGACAGATCAGTAGTGATACCTTGGCAACTGGGTTTCGTGAAGTTATGAGCAAGGGCTTTGTGCTTGATTGGCGGAGAGCCATGGATTGCTCTGAGTGTGAGATATCTGGAGGACTTTGTGGGCAAAATCCAACCAATCATAAGACGCTATGCTTTTGCGGGGATGGCAGTATCGCAACCAAAAGCTGCAGCAAAGGTGGCGTTACTGCTGCAGTCGTTGTGCTTGTCATGCTCACTCTCTTTTATTTCTATCAACGTCGAAAGAAGACCGGTTATGCAAAGTCATGCATACAATCACGTACTGCTTCTTCTGTTTCCTCCAAGAAGATAGAGGATCCTGAGATTAATGCAAGTAAATATTTTGGGGTCCTTGTCTTCACATACAGTGAACTTGAAGAGGCCACTAACAATTTCGATTCAGCCAGAGAACTTGGAGATGGAGGTTTTGGAACAGTATACTTTGGTAAACTTCGGGACGGCCGTTATGTTGCAGTGAAGCGACTGTATGAGAACAATTACAAGAGAGTACAACAATTTATAAACGAAGTTCAGATCCTGACACGCTTGCGTCATACACACCTTGTGTCCCTCTATGGCTGCACTTCTAGGCACAGTCGCGAACTCCTTCTTGTATATGAGTACATTCCTAATGGAACAGTCGCGGATCATCTTCATGGCGATCGAGCAAAGCCAGGCTCACTGCCTTGGAATATCAGAATGAACATAGCTATTGAAACTGCAAGTGCTTTGGCATACCTTCATGCCTCAGACATCATCCATCGAGACGTCAAAACCAACAACATCCTCCTGGACAACCATTTTGTTGTTAAAGTTGCAGACTTTGGATTGTCCCGTCTCTTCCCAGAAGATGTCACCCATCTTTCCACAGCCCCACAAGGAACTCCAGGCTACGTTGACCCAGAGTACCATGACTGTTATAAGCTCACTGACAAAAGTGACGTGTATAGCTTTGGTGTGGTTTTGATTGAGCTGATATCATCATTGCCAGCTGTGGACATCACACGTCATCGACAGGAGGTCAATCTATCCACCATGGCAATCAACAAGATCCAGAACCGGGCACTGCATGAGCTGGTGGATCCTACGCTCGGGTTTGAGTCGGATCAAAAGGTGAGGAAGATGATTAATGCTGTGGCAGAGATGGCATTTCAGTGTTTGCAAAATTTGAAGGATATGAGGCCTTCAATGGAGGAAGTTCTAGAGATGCTAAGGGATATAGAGAGTGATGGGAAGTATAGGAGCAAGCCGGAGGTGATGGATATTTCTGCGGATCATGTTGGGTTGCTCAAGAATGATCTGCCTCCGCCTTCACTTGATTCTAATTTGGCAAGCAACTCTACAACTTCAAATTCTAGCAATTGA 1941 0.4549 MSKPLYFIAALSFFCLMRSIVEVSSSSICSPSAGCGNGVPIRYPFWVNNNSAQEYCGYPHFGLKCSEHGRPIISLPNDKYYVTDINYDDDTVTLVDTDVVDQTCPRARYNVSLENLPLSVNNQLNMNLTFYFNCSVSNKVNNLPSDPIRCLKNEGSKQSYVETTPWDTYGLNIECAEKVVVVVAKQGQISSDTLATGFREVMSKGFVLDWRRAMDCSECEISGGLCGQNPTNHKTLCFCGDGSIATKSCSKGGVTAAVVVLVMLTLFYFYQRRKKTGYAKSCIQSRTASSVSSKKIEDPEINASKYFGVLVFTYSELEEATNNFDSARELGDGGFGTVYFGKLRDGRYVAVKRLYENNYKRVQQFINEVQILTRLRHTHLVSLYGCTSRHSRELLLVYEYIPNGTVADHLHGDRAKPGSLPWNIRMNIAIETASALAYLHASDIIHRDVKTNNILLDNHFVVKVADFGLSRLFPEDVTHLSTAPQGTPGYVDPEYHDCYKLTDKSDVYSFGVVLIELISSLPAVDITRHRQEVNLSTMAINKIQNRALHELVDPTLGFESDQKVRKMINAVAEMAFQCLQNLKDMRPSMEEVLEMLRDIESDGKYRSKPEVMDISADHVGLLKNDLPPPSLDSNLASNSTTSNSSN 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3839g00009 646 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 6 644 IPR044652 GO:0004672
Pral3839g00009 646 ProSitePatterns Protein kinases ATP-binding region signature. 330 352 IPR017441 GO:0005524
Pral3839g00009 646 ProSiteProfiles Protein kinase domain profile. 324 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3839g00009 646 Gene3D Transferase(Phosphotransferase) domain 1 401 611 - -
Pral3839g00009 646 MobiDBLite consensus disorder prediction 630 646 - -
Pral3839g00009 646 SMART serkin_6 324 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3839g00009 646 Gene3D Phosphorylase Kinase; domain 1 293 400 - -
Pral3839g00009 646 Pfam Wall-associated receptor kinase galacturonan-binding 29 96 IPR025287 GO:0030247
Pral3839g00009 646 Pfam Wall-associated receptor kinase C-terminal 160 242 IPR032872 -
Pral3839g00009 646 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Pral3839g00009 646 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 296 400 - -
Pral3839g00009 646 MobiDBLite consensus disorder prediction 623 646 - -
Pral3839g00009 646 Pfam Protein kinase domain 326 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3839g00009 646 SUPERFAMILY Protein kinase-like (PK-like) 307 612 IPR011009 -
Pral3839g00009 646 FunFam Wall-associated receptor kinase-like 20 401 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3839g00009 Pral-Chr3839 198755 208381 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3839g00009 41 645 Receptor kinase-like Gene Family AT1G25390 46.154 2.30e-156 462
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral3839g00009 Pkinase 9.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3839g00009 - - qlo:115964068 684.1