Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3839g00008 ATGACCAACTCTTTCAGAGATAAATTGGGACAAGGTGGTTATGGTTCTGTATACAAAGGAAAACTCCTCAATGGCCACCCTGTTGCTGTAAAGTTATTGAAGGCATCAAAAGAGAACGGGGAAGAGTTTATCAATGAGGTTGCCAGCAGCAGTCGGACTTCCCATGTAAATGTTGTTACACTTCTTGGGTTTTGTTTTGAAGGCAAACAGAAGGCTCTCATATATGAATTTATGTGCAATGGATCTCTTGACAAGTTCATTCACAACAATGCAGATAAGAATAGTCTATGCCTGACTTGGGAAAATTTGTACCAAATTGCAATTGGGATAGCTCGAGGACTTGAGTATTTGCACAGAGGATGCAACACTCGAATTCTACATTTGGATATAAAGCCACATAACATCCTTTTAGATGAAAATTTTTGTCCCAAGATCTCAGATTTTGGTCTTGCTAAGCTTTGTCCTAAAAAAGAAAGCATCATTTCAATTTCAGAAGCCAGAGGAACAATAGGATATCTTGCTCCAGAAGTTTGGAATAGAAATATAGGTGGAGTTTCGTATAAGTCTGATGTTTATAGCTATGGGATGATGCTATTAGATATGGTTGGAGGGAGAAAGAACATGAATGTTGAAACCAATTGTTCAACTGAGAAATATTTCCCAAATTATATTTATGTTCAACTTGAGCAAGACAGTAATTTGGGATGTAATGGAGCCAGTAACGCGGAGGAACATGATATTGCAAAGAGAATGACCATTGTGGGTTTGTGGTGCATCCAAACATTTCCAAGTCAAAGACCTACAATGAGTAGGGTGATTGAAATGTTAGAAAGAAAATTTGAGCCATTGGAAATGCCACCAAAACCTGTCATGCCTTCCCCTCCAAGATTAGAACTAGAATCTTCCACCACTGGTACTACCACAACAGAGATTTTGGGTTTTCAAAGCGCTTCCCACATGCTGCTGGAGGAACATTAG 978 0.3896 MTNSFRDKLGQGGYGSVYKGKLLNGHPVAVKLLKASKENGEEFINEVASSSRTSHVNVVTLLGFCFEGKQKALIYEFMCNGSLDKFIHNNADKNSLCLTWENLYQIAIGIARGLEYLHRGCNTRILHLDIKPHNILLDENFCPKISDFGLAKLCPKKESIISISEARGTIGYLAPEVWNRNIGGVSYKSDVYSYGMMLLDMVGGRKNMNVETNCSTEKYFPNYIYVQLEQDSNLGCNGASNAEEHDIAKRMTIVGLWCIQTFPSQRPTMSRVIEMLERKFEPLEMPPKPVMPSPPRLELESSTTGTTTTEILGFQSASHMLLEEH 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3839g00008 325 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Pral3839g00008 325 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Pral3839g00008 325 SMART serkin_6 3 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3839g00008 325 SUPERFAMILY Protein kinase-like (PK-like) 5 277 IPR011009 -
Pral3839g00008 325 Pfam Protein tyrosine and serine/threonine kinase 5 276 IPR001245 GO:0004672|GO:0006468
Pral3839g00008 325 FunFam PR5-like receptor kinase 78 288 - -
Pral3839g00008 325 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 296 IPR045874 GO:0004672
Pral3839g00008 325 PIRSF ILK 3 285 - -
Pral3839g00008 325 Gene3D Phosphorylase Kinase; domain 1 1 77 - -
Pral3839g00008 325 Gene3D Transferase(Phosphotransferase) domain 1 78 284 - -
Pral3839g00008 325 MobiDBLite consensus disorder prediction 284 306 - -
Pral3839g00008 325 ProSiteProfiles Protein kinase domain profile. 3 280 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3839g00008 Pral-Chr3839 165522 166559 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3839g00008 1 304 Receptor kinase-like Gene Family AT1G66910 57.329 1.12e-120 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral3839g00008 PK_Tyr_Ser-Thr 3.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3839g00008 - - pcin:129304394 478.404