Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3839g00007 ATGTCAAAACCCCTGTATTTCATTGCCGCTCTCTCCTTCTTCTGTCTCACGCACAGTATTGTGGAAGTATCTTCTTCTTCAATATGTTCCCACTCTGCTGATTGCGGTAATGGATTTCCCATTCGGTATCCTTTCTGGGTGAACAACAATTCCTCCCAAGAATACTGCGGTTACCCTGACTTTGATCTCAAATGCTCCGATGACGGCCGACCCTTCATTAGTCTTCCAAACGACGCATACTATGTCACAGATATAAACTACCATAATTACACATTAACACTTGTGGACATGGATGTGGTGGACCAACCCTGCCCCAGAGCACGCCACAATGTTAGCTTAGGAAACCTCCCACTGAGTGTTAATAATCAGCTGAATATGAACCTGAGTTTCTACTTCAATTGCAGCGTATCTAATAAAGTCAATAATCTTCCTTCCAACCCCATACGGTGCTTGAAAAATGAAGGATCGAAGCAGTCATATATCGAAACGACGCCGTGGGACACATATGGGCTGAATATAGAATGTGAGGAGAAGGTGGTGGTAGTAGTGGTGAAGCAGGAAGAGATCAGTAGTGATACCTTGGTAACTGGGTTTGGTGAAGCTATGAACAAGGGCTTTGTGCTTGATTGGCGGAGAGCCATGGATTGCTCTGAGTGTGAGATGTCTGGAGGACTTTGTGGGCAAAATCCAACCAATAATCAGACGCTATGCTTTTGCGGGGATGGCAGTTTCGCAACCAAAAGCTGCAGCAAAGCCAGAACAGGAGGACGTGCATTAAGAAATAAACTCATTATAGATGTCAAGAAAATGACCAACTCTTTCAAAGATAAATTGGGACAAGGTGGTTATGGTTCTGTATACAAAGGAAAACTCCTCAATGGCCACCCTGTTGCTGTAAAGTTATTGAAGGCATCAAAAGAGAACGGGGAAGAGTTTATCAATGAGGTTGCCAGCAGCAGTCGGACTTCCCATGTAAATGTTGTTACACTTCTTGGGTTTTGTTTTGAAGGCAAACAGAAGGCTCTCATATATGAATTTATGTGCAATGGATCTCTTGACAAGTTCATTCACAACAATGCAGATAAGAATAGTCTATGCCTGACTTGGGAAAATTTGTACCAAATTGCAATTGGGATAGCTCGAGGACTTGAGTATTTGCACAGAGGATGCAACACTCGAATTCTACATTTTGATATAAAGCCACATAACATCCTTTTAGATGAAAATTTTTGTCCCAAGATCTCAGATTTTGGTCTTGCTAAGCTTTGTCCTAAAAAAGAAAGCATCATTTCAATTTCAGAAGCCAGAGGAACAATAGGATATCTTGCTCCAGAAGTTTGGAATAGAAATATAGGTGGAGTTTCGTATAAGTCTGATGTTTATAGCTATGGGATGATGCTATTAGATATGGTTGGAGGGAGAAAGAACATGAATGTTGAAACCAATTGTTCAACTAAAAAATATTTCCCAAATTATATTTATGTTCAACTTGAGCAAGACAGTAATTTGGGATGTAATGGAGCCAGTAACGCAGAGGAACATGATATTGCAAAGAGAATGACCATTGTGGGTTTGTGGTGCATCCAAACATTTCCAAGTCAAAGACCTACAATGAGTAGGGTGATTGAAATGTTGGAAAGAAAATTTGAGCCATTGGAAATGCCACCAAAACCTGTCATGCCTTCCCCTCCAAGATTAGAACTAGAATCTTCTACCATTGCTACTACCACAACAGAGATTTTGGGTTTTCAAAGCTCTTCCCACATGCTGCTGGAGGAACATTAG 1785 0.4112 MSKPLYFIAALSFFCLTHSIVEVSSSSICSHSADCGNGFPIRYPFWVNNNSSQEYCGYPDFDLKCSDDGRPFISLPNDAYYVTDINYHNYTLTLVDMDVVDQPCPRARHNVSLGNLPLSVNNQLNMNLSFYFNCSVSNKVNNLPSNPIRCLKNEGSKQSYIETTPWDTYGLNIECEEKVVVVVVKQEEISSDTLVTGFGEAMNKGFVLDWRRAMDCSECEMSGGLCGQNPTNNQTLCFCGDGSFATKSCSKARTGGRALRNKLIIDVKKMTNSFKDKLGQGGYGSVYKGKLLNGHPVAVKLLKASKENGEEFINEVASSSRTSHVNVVTLLGFCFEGKQKALIYEFMCNGSLDKFIHNNADKNSLCLTWENLYQIAIGIARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKLCPKKESIISISEARGTIGYLAPEVWNRNIGGVSYKSDVYSYGMMLLDMVGGRKNMNVETNCSTKKYFPNYIYVQLEQDSNLGCNGASNAEEHDIAKRMTIVGLWCIQTFPSQRPTMSRVIEMLERKFEPLEMPPKPVMPSPPRLELESSTIATTTTEILGFQSSSHMLLEEH 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3839g00007 594 Pfam Wall-associated receptor kinase C-terminal 162 242 IPR032872 -
Pral3839g00007 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 394 406 IPR008271 GO:0004672|GO:0006468
Pral3839g00007 594 SMART serkin_6 272 531 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3839g00007 594 ProSitePatterns Protein kinases ATP-binding region signature. 278 300 IPR017441 GO:0005524
Pral3839g00007 594 PANTHER RUST RESISTANCE KINASE LR10-RELATED 266 565 IPR045874 GO:0004672
Pral3839g00007 594 Gene3D Transferase(Phosphotransferase) domain 1 347 553 - -
Pral3839g00007 594 SUPERFAMILY Protein kinase-like (PK-like) 264 546 IPR011009 -
Pral3839g00007 594 FunFam PR5-like receptor kinase 347 557 - -
Pral3839g00007 594 ProSiteProfiles Protein kinase domain profile. 272 549 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3839g00007 594 Gene3D Phosphorylase Kinase; domain 1 244 346 - -
Pral3839g00007 594 Pfam Protein tyrosine and serine/threonine kinase 274 545 IPR001245 GO:0004672|GO:0006468
Pral3839g00007 594 Pfam Wall-associated receptor kinase galacturonan-binding 29 96 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3839g00007 Pral-Chr3839 132436 141900 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3839g00007 29 558 Receptor kinase-like Gene Family AT5G38260 41.197 2.29e-136 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral3839g00007 PK_Tyr_Ser-Thr 2.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3839g00007 - - gmx:100796618 605.52