Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3839g00006 ATGTCAAAACCCCTGTATTTCATTGCCGCTCTCTCCTTCTTCTGTCTCACGCACAGTATTGTGGAAGTATCTTCTTCTTCAATATGTTCCCACTCTGCTGATTGCGGTAATGGATTTCCCATTCGGTATCCTTTCTGGGTGAACAACAATTCCTCCCAAGAATACTGCGGTTACCCTGACTTTGATCTCAAATGCTCCGATGACGGCCGACCCTTCATTAGTCTTCCAAACGACGCATACTATGTCACAGATATAAACTACCATAATTACACATTAACACTTGTGGACATGGATGTGGTGGACCAACCCTGCCCCAGAGCACGCCACAATGTTAGCTTAGGAAACCTCCCACTGAGTGTTAATAATCAGCTGAATATGAACCTGAGTTTCTACTTCAATTGCAGCGTATCTAATAAAGTCAATAATCTTCCTTCCAACCCCATACGGTGCTTGAAAAATGAAGGATCGAAGCAGTCATATATCGAAACGACGCCGTGGGACACATATGGGCTGAATATAGAATGTGAGGAGAAGGTGGTGGTAGTAGTGGTGAAGCAGGAAGAGATCAGTAGTGATACCTTGGTAACTGGGTTTGGTGAAGCTATGAACAAGGGCTTTGTGCTTGATTGGCGGAGAGCCATGGATTGCTCTGAGTGTGAGATGTCTGGAGGACTTTGTGGGCAAAATCCAACCAATAATCAGACGCTATGCTTTTGCGGGGATGGCAGTTTCGCAACCAAAAGCTGCAGCAAAGCCAGAACAGGAGGACGTGCATTAAGAAATAAACTCATTATAGTTGGTGTTACTGCTGTAGTCGTTAGTGGAGCAATAGGACTGCTGCTTTCTTGTAAGATCAAATCACGGAGGCGAATAATTGGATTATGCAAGACATCTCAGGATGAACAAAATATTGAGGCCTTCATTAGAAATCACGGTTCTCTAGCTCTTACAAGATATAAATTTGCAGATGTCAAGAAAATGACCAACTCTTTCAAAGATAAATTGGGACAAGGTGGTTATGGTTCTGTATACAAAGGAAAACTCCTCAATGGCCACCCTGTTGCTGTAAAGTTATTGAAGGCATCAAAAGAGAACGGGGAAGAGTTTATCAATGAGGTTGCCAGCAGCAGTCGGACTTCCCATGTAAATGTTGTTACACTTCTTGGGTTTTGTTTTGAAGGCAAACAGAAGGCTCTCATATATGAATTTATGTGCAATGGATCTCTTGACAAGTTCATTCACAACAATGCAGATAAGAATAGTCTATGCCTGACTTGGGAAAATTTGTACCAAATTGCAATTGGGATAGCTCGAGGACTTGAGTATTTGCACAGAGGATGCAACACTCGAATTCTACATTTTGATATAAAGCCACATAACATCCTTTTAGATGAAAATTTTTGTCCCAAGATCTCAGATTTTGGTCTTGCTAAGCTTTGTCCTAAAAAAGAAAGCATCATTTCAATTTCAGAAGCCAGAGGAACAATAGGATATCTTGCTCCAGAAGTTTGGAATAGAAATATAGGTGGAGTTTCGTATAAGTCTGATGTTTATAGCTATGGGATGATGCTATTAGATATGGTTGGAGGGAGAAAGAACATGAATGTTGAAACCAATTGTTCAACTAAAAAATATTTCCCAAATTATATTTATGTTCAACTTGAGCAAGACAGTAATTTGGGATGTAATGGAGCCAGTAACGCAGAGGAACATGATATTGCAAAGAGAATGACCATTGTGGGTTTGTGGTGCATCCAAACATTTCCAAGTCAAAGACCTACAATGAGTAGGGTGATTGAAATGTTGGAAAGAAAATTTGAGCCATTGGAAATGCCACCAAAACCTGTCATGCCTTCCCCTCCAAGATTAGAACTAGAATCTTCTACCATTGCTACTACCACAACAGAGATTTTGGGTTTTCAAAGCTCTTCCCACATGCTGCTGGAGGAACATTAG 1956 0.4095 MSKPLYFIAALSFFCLTHSIVEVSSSSICSHSADCGNGFPIRYPFWVNNNSSQEYCGYPDFDLKCSDDGRPFISLPNDAYYVTDINYHNYTLTLVDMDVVDQPCPRARHNVSLGNLPLSVNNQLNMNLSFYFNCSVSNKVNNLPSNPIRCLKNEGSKQSYIETTPWDTYGLNIECEEKVVVVVVKQEEISSDTLVTGFGEAMNKGFVLDWRRAMDCSECEMSGGLCGQNPTNNQTLCFCGDGSFATKSCSKARTGGRALRNKLIIVGVTAVVVSGAIGLLLSCKIKSRRRIIGLCKTSQDEQNIEAFIRNHGSLALTRYKFADVKKMTNSFKDKLGQGGYGSVYKGKLLNGHPVAVKLLKASKENGEEFINEVASSSRTSHVNVVTLLGFCFEGKQKALIYEFMCNGSLDKFIHNNADKNSLCLTWENLYQIAIGIARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKLCPKKESIISISEARGTIGYLAPEVWNRNIGGVSYKSDVYSYGMMLLDMVGGRKNMNVETNCSTKKYFPNYIYVQLEQDSNLGCNGASNAEEHDIAKRMTIVGLWCIQTFPSQRPTMSRVIEMLERKFEPLEMPPKPVMPSPPRLELESSTIATTTTEILGFQSSSHMLLEEH 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3839g00006 651 ProSitePatterns Protein kinases ATP-binding region signature. 335 357 IPR017441 GO:0005524
Pral3839g00006 651 ProSiteProfiles Protein kinase domain profile. 329 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3839g00006 651 FunFam PR5-like receptor kinase 404 614 - -
Pral3839g00006 651 Pfam Wall-associated receptor kinase C-terminal 162 242 IPR032872 -
Pral3839g00006 651 FunFam serine/threonine-protein kinase PBS1-like 296 403 - -
Pral3839g00006 651 SMART serkin_6 329 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3839g00006 651 Pfam Protein tyrosine and serine/threonine kinase 331 602 IPR001245 GO:0004672|GO:0006468
Pral3839g00006 651 PANTHER RUST RESISTANCE KINASE LR10-RELATED 300 622 IPR045874 GO:0004672
Pral3839g00006 651 Pfam Wall-associated receptor kinase galacturonan-binding 29 96 IPR025287 GO:0030247
Pral3839g00006 651 Gene3D Transferase(Phosphotransferase) domain 1 404 610 - -
Pral3839g00006 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 451 463 IPR008271 GO:0004672|GO:0006468
Pral3839g00006 651 Gene3D Phosphorylase Kinase; domain 1 293 403 - -
Pral3839g00006 651 SUPERFAMILY Protein kinase-like (PK-like) 313 603 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3839g00006 Pral-Chr3839 132436 158371 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3839g00006 28 629 Receptor kinase-like Gene Family AT1G66910 40.775 2.63e-141 425
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral3839g00006 PK_Tyr_Ser-Thr 2.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3839g00006 - - gmx:100796618 664.07