Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3839g00005 ATGAGTCTTCCAAACGACACATACTATGTCACAGATATAAACTACCATAATTATACAGTAACACTTGTGGACACGGATGTGGTGGACCAAACCTGCCCCAGAGCACGCCAAAATGTTAGCTTAGGAAACCTCCCACTGAGTGTTAATAATCACCTGAATATGAACCTGACTTTCTACTTCAATTGCAGCGTATCTAATAAAGTCAATAATCTTCCTTCCGACCCCATACGGTGCTTGAAAAATGAAGGATCGAAGCAGTCATATGTCGAGACGACGTCGTGGGACACATATGGGTTGAATATAGAATGTGAGGAGAAGGTGGTGGTAGTAGTGGTGAAGCAGGAAGAGATCAGTAGTGATACCTTGGCAACTGGGTTTCGTGAAGTTATGAAAAAGGGCTTTGTGCTTGATTGGCGGAGTGCCATGGATTGCTCTGAGTGTGAGATATCTGGAGGACTTTGTGGGCGCAATCCAACCAATCATCAGGCGCTATGCTTTTGCGGGGATGGCAGTATCGCAACCAAAAGCTGCAGCAAAGGAAGAGGGGGATTTTCATTGAAAAATAAATTCATTGTAGGGGGTGTAACTGCTGCAGTCGTTGTGCTTGTCATGCTCACTCTCTTTTATTTCTATCAACGTCGACAGAAGACCGGTTATGCAAGGTCATACATACAATCACGTACTGCTTCTTCTATTTCCTCCATGAAGATGGACGATCCTGAGATTAATGCAAGTAAATATTTCGGAGTCCCTGTCTTCACATACAGTGAACTTGAAGAGGCCACTAACAATTTCGATTCAGCCAGAGAACTTGGAGATGGAGGTTTTGGGACAGTATACTTTGGTAAACTTCGGGACGGTCGTTATGTTGCAGTGAAGCGACTGTACGAGAACAATTACAAGAGAGTAGAACAATTTATAAACGAAGTTCAAATCCTGACACGCTTGCGTCATGCAAACCTTGTGTCCCTTTATGGCTGCACTTCTCGGCACAGTCGCGAACTCCTTCTTGTATATGAGTACATTCCTAATGGAACAGTTGCGGATCATCTTCATGGTGATCGAGCAAAGCCAGGCTCGCTGCCTTGGAATATCAGAATGAACATAGCCATTGAAACTGCAAGTGCTTTGGCGTACCTTCATGCCTCAGACATCATTCATCGAGACGTCAAAACCAACAACATCCTCCTGGACAACCAGTTTGTTGTTAAAGTTGCAGACTTTGGATTGTCCCGTCTCTTCCCAGAAGATGTCACCCATATTTCCACAGCCCCACAAGGAACTCCAGGCTACGTTGACCCAGAGTACCATGAGTGCTACAAGCTCACTGACAAAAGTGACGTGTATAGCTTTGGTGTGGTTTTGATTGAGCTGATATCATCATTGCCAGCTGTGGACATCACACGTCATCGACACGAGGTCAATCTGTCCACCATGGCAATCAACAAGATCCAGAACCGGGCACTGCATGAGCTGGTGGATCCTATGCTGGGGTTTGAGTCGGATCAAAAGGTGAGGAAGATGATTAATGCTGCGGCAGAGCTGGCATTTCAGTGTTTGCAGAATTTGAAGGATATGAGACCTTCAATGAAGGAAGTTCTGGAGATGCTGAGGGATATAGAGGGTGATGGGAAGCATGGGAGCAAGCCCGAGGTGATGGATATTTCTGCAGATCATGTTGGGTTGCTCAAGAATGATCTGCCTCCGCCTTCACTTGATTCTAATTTGGCAAGCAAGTCTACAACTTCAAATTCCAGCAATTGA 1764 0.4524 MSLPNDTYYVTDINYHNYTVTLVDTDVVDQTCPRARQNVSLGNLPLSVNNHLNMNLTFYFNCSVSNKVNNLPSDPIRCLKNEGSKQSYVETTSWDTYGLNIECEEKVVVVVVKQEEISSDTLATGFREVMKKGFVLDWRSAMDCSECEISGGLCGRNPTNHQALCFCGDGSIATKSCSKGRGGFSLKNKFIVGGVTAAVVVLVMLTLFYFYQRRQKTGYARSYIQSRTASSISSMKMDDPEINASKYFGVPVFTYSELEEATNNFDSARELGDGGFGTVYFGKLRDGRYVAVKRLYENNYKRVEQFINEVQILTRLRHANLVSLYGCTSRHSRELLLVYEYIPNGTVADHLHGDRAKPGSLPWNIRMNIAIETASALAYLHASDIIHRDVKTNNILLDNQFVVKVADFGLSRLFPEDVTHISTAPQGTPGYVDPEYHECYKLTDKSDVYSFGVVLIELISSLPAVDITRHRHEVNLSTMAINKIQNRALHELVDPMLGFESDQKVRKMINAAAELAFQCLQNLKDMRPSMKEVLEMLRDIEGDGKHGSKPEVMDISADHVGLLKNDLPPPSLDSNLASKSTTSNSSN 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3839g00005 587 FunFam Wall-associated receptor kinase-like 20 342 549 - -
Pral3839g00005 587 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 3 585 IPR044652 GO:0004672
Pral3839g00005 587 SUPERFAMILY Protein kinase-like (PK-like) 244 537 IPR011009 -
Pral3839g00005 587 Gene3D Phosphorylase Kinase; domain 1 235 341 - -
Pral3839g00005 587 Pfam Protein kinase domain 267 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3839g00005 587 FunFam WAK1-OsWAK receptor-like cytoplasmic kinase (OsWAK-RLCK) 237 341 - -
Pral3839g00005 587 ProSitePatterns Protein kinases ATP-binding region signature. 271 293 IPR017441 GO:0005524
Pral3839g00005 587 ProSiteProfiles Protein kinase domain profile. 265 540 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3839g00005 587 SMART serkin_6 265 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3839g00005 587 Pfam Wall-associated receptor kinase C-terminal 86 170 IPR032872 -
Pral3839g00005 587 ProSitePatterns Serine/Threonine protein kinases active-site signature. 385 397 IPR008271 GO:0004672|GO:0006468
Pral3839g00005 587 MobiDBLite consensus disorder prediction 560 587 - -
Pral3839g00005 587 MobiDBLite consensus disorder prediction 571 587 - -
Pral3839g00005 587 Gene3D Transferase(Phosphotransferase) domain 1 342 547 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3839g00005 Pral-Chr3839 98919 117350 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3839g00005 143 586 Receptor kinase-like Gene Family AT1G25390 53.680 2.31e-157 463
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral3839g00005 Pkinase 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3839g00005 - - qlo:115964068 660.218