Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3839g00004 ATGGGATTATGCAAGACATCTAAGGTTGACCAAAATATCGAGGCCTTCATTAGAAATCATGGTCCTTTAGCTCTCACTAGATATAAATTTACAGATGTCAAGAAAATGATCAACTCTTTCAAAGATAAATTGGGACAAGATGGATATGGTTCTGTATACAAAGGAAAACTACCCAATGGCTATCCTATTGCTGTAAAGTTATTGAAGGCATCAAAACAGAATGGGGAAGAATTTATCAACGAGATTGCCAGTAGGACTTACCATGTAAATGTCGTTACCCTTCTTGGGTTTTGTTTTGAAGGCCAAAAAAAGGCTCTCATATATGAATTTATGTCCAATGGATCTCTTGACAAGTTCATTCACAACAATGCAAATCAAAATAGTCTATGCTTGAGTTGGGAGAATTTGTACCAAATTGTAGGTGGGATAGCTTGAGGGCTTGAGTATTTACATAGAGGTATTCTTCATTTTGATATAAAGCCCCATAACATCCTTTTAGATGAAAGCTTTTGTTCCAAGATCTCAGATTTTGGTCTTGCTAAGCTTTGTCCAAAAAACAAAAGTATCATTTTAATTTCAAAAGCAAGAGGAACTAGAGGTTATCTCGCTCCGGAGGTTTGGAATAGAAACATAGGTGGAGTTTCGCATAAGTCTGATGTTTATAGCTATGGGATGATGTTATTAGATATGGCAGGAGGGAGAAAGAACCTGAATTTTGAGACCGATTGTTCAACTGATAAATATTTTCTCAATTATATTTATGTTCAATTTGAGCAAGACAGCAATTTGGGATTTAATGGTGATAATAATGTGGAGGAAAATGATATTGCAAAGAGAATGACCATTGTGGGTTTGTGGGCCAGTCACCGGTGCAAGGAGGCCGGCGACAAGCAATTTCATCAGGTCACAAAGCCCGCGTTTTGGAGCCAAAAGGCGATCTGGCCATTCTCTGCAATGATCATGCTGTACAAGGGTCCTCCTTCTGTTGTTTTACGTCAGCTTCTCTTGAAGACCTTCTTCTTCGTTCCCATTCTCTTTTATGTTACCACTGCAAATGAACAATTTTCAGCTTGCAAGCCTTTTAGCTGCGGAAACGTCACCAGTCTGAGCTTCCCTTTCTGGGTCGACTCACTGCCTGCTTATTGTGGTCATCCTAAGTTGAAGCTTAATTGTGACGGAGACAATGTTACTATCAACATTAATTCCCAGACTTTTAGGGTAATCAATGTTAACTCCGCTGCTAGAACTCTTACGATTGCAAGAATGGATTTGTGGGGTACCAAGTGTTCCAATCAGTTCACAAACATCACGTTGGATTATTCTTTCTTTGACTACAGTCCCAATGATGAAAACACTACTCTATTATACGGCTGCGACCCTTCAAGCAATGCCACTCTGAATTCATCAACTGCTGTGAGATTTGATTGCCCCTTACATGGTATTCCTCGTGAAGCATACTTTTTGTGGACCAACAATTGGACCAGGACTGGTCTGGGGTGTAGAACCAGCATCAATGTTCCTGTTCTGGGTGTGGCACTGAGAAGTTTCATAGATCCTGGTGATGTTATAGATCAAGGTTTTGAGGTTAAATGGGAACTGAAAGGAGGGTGGTGTGATGATTGCAGAATTTCGGGTGGAAGATGCGGTTACAACGCAAGTCTGGATGAATTTACATGTTTCTGTCCCGATGGGGTTTGTTTTGCTGATCGATTAGAAGAAGAAGCAGCGCCAGCACCCCGGCCCGAGCCAAGGCCTCCTCCTTCTTCAGGGTCATCAACAGAGGGTTGTCTTATTGCTGCAATAGTTCTTGGAGCAATTGGACTGATGCTTATTTGGTGTTGTCAAACAAAGTCGTGGGGGCAAACAATAGGATTGTGCGAGACATCTATGGTGGACCAAAATATCGAGGCCTTCATTAGAAATCGTGGTCCCTTAGCTCTCACAAGATATAAATTTGCAGATGTCAAGAAAATGACCAACTCTTTCAAAGATAAATTGGGACAAGGTGGTTATGGTTCTGTATACAAGGGAAAACTCCTCAATGGCCGCCCTGTTGCTGTAAAGTTATTGAAGGCATCAAAACAGAATGGGGAAGAATTTATCAACGAGGTTGCTAGCATCAGTAGGACTTCCCATGTAAATGTTGTTACCCTTCTTGGGTTTTGTTTTGAAGGCAAACAAAAGGCTCTCATATATGAATTTATGTCCAATGGATCTCTTGACAAGTTCATTCCCAGCAATGTGGATAAAAATAGTCTATGCTTGACTTGGGAAAATTTGTACCAAATCGCAATTGGGATAGCTCGAGGACTTGAGTATTTGCATAGAGGATGCAACACTCGAATTCTACATTTTGATATAAAGCCACATAACATCCTTTTAGATGAAAATTTTTGTCCCAAGATCTCAGATTTTGGTCTTGCTAAGCTTTGTCCTAAAAAAGAAAGCTTCATTTCAATTTCAGAAGCTAGAGGAACAATAGGATATCTTGCTCCAGAAGTTTGGAATAGAAACATAGGTGGAGTTTCTTATAAGTCTGATGTTTATAGCTATGGGATGATGCTATTAGATATGGTTGGAGGGAGAAAGAACAAGAATGTTGAAACCAATTGTTCGACTGAGAAATATTTCCCAGATTATATTTATGCTCAACTTGAGCAAGACAGCAATTTGGGATGTGATGGGGCCGATAACACGGGGGAAAATGATATTGCAAAGAAAATGACCATTGTGGCTTTGTGGTGCATCCAAACATTTCCAGGTCAAAGACCTACAATGAGTAGAGTGATTGAAATGTTAGAAAGAAAACCTGACCTGTTGGAAATGCCACCAAAACCTATCATGCCTTCCCCTCCCAGATTAGAACTAGAATCTTCCACCACTGCTATGACCACAACAGAAATTGTGGGTTTTCAAAGCCCTTCCCACATGTTGCTAGAGGAACACTAG 2949 0.4032 MGLCKTSKVDQNIEAFIRNHGPLALTRYKFTDVKKMINSFKDKLGQDGYGSVYKGKLPNGYPIAVKLLKASKQNGEEFINEIASRTYHVNVVTLLGFCFEGQKKALIYEFMSNGSLDKFIHNNANQNSLCLSWENLYQIVGGIAXGLEYLHRGXILHFDIKPHNILLDESFCSKISDFGLAKLCPKNKSIILISKARGTRGYLAPEVWNRNIGGVSHKSDVYSYGMMLLDMAGGRKNLNFETDCSTDKYFLNYIYVQFEQDSNLGFNGDNNVEENDIAKRMTIVGLWASHRCKEAGDKQFHQVTKPAFWSQKAIWPFSAMIMLYKGPPSVVLRQLLLKTFFFVPILFYVTTANEQFSACKPFSCGNVTSLSFPFWVDSLPAYCGHPKLKLNCDGDNVTININSQTFRVINVNSAARTLTIARMDLWGTKCSNQFTNITLDYSFFDYSPNDENTTLLYGCDPSSNATLNSSTAVRFDCPLHGIPREAYFLWTNNWTRTGLGCRTSINVPVLGVALRSFIDPGDVIDQGFEVKWELKGGWCDDCRISGGRCGYNASLDEFTCFCPDGVCFADRLEEEAAPAPRPEPRPPPSSGSSTEGCLIAAIVLGAIGLMLIWCCQTKSWGQTIGLCETSMVDQNIEAFIRNRGPLALTRYKFADVKKMTNSFKDKLGQGGYGSVYKGKLLNGRPVAVKLLKASKQNGEEFINEVASISRTSHVNVVTLLGFCFEGKQKALIYEFMSNGSLDKFIPSNVDKNSLCLTWENLYQIAIGIARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKLCPKKESFISISEARGTIGYLAPEVWNRNIGGVSYKSDVYSYGMMLLDMVGGRKNKNVETNCSTEKYFPDYIYAQLEQDSNLGCDGADNTGENDIAKKMTIVALWCIQTFPGQRPTMSRVIEMLERKPDLLEMPPKPIMPSPPRLELESSTTAMTTTEIVGFQSPSHMLLEEH 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3839g00004 983 FunFam Os07g0541700 protein 111 199 - -
Pral3839g00004 983 SMART serkin_6 38 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3839g00004 983 SMART serkin_6 661 941 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3839g00004 983 Pfam Wall-associated receptor kinase C-terminal 499 565 IPR032872 -
Pral3839g00004 983 Gene3D Transferase(Phosphotransferase) domain 1 736 941 - -
Pral3839g00004 983 ProSiteProfiles Protein kinase domain profile. 38 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3839g00004 983 PANTHER RUST RESISTANCE KINASE LR10-RELATED 633 956 IPR045874 GO:0004672
Pral3839g00004 983 SUPERFAMILY Protein kinase-like (PK-like) 23 257 IPR011009 -
Pral3839g00004 983 SUPERFAMILY Protein kinase-like (PK-like) 646 935 IPR011009 -
Pral3839g00004 983 ProSitePatterns Serine/Threonine protein kinases active-site signature. 155 167 IPR008271 GO:0004672|GO:0006468
Pral3839g00004 983 ProSitePatterns Serine/Threonine protein kinases active-site signature. 783 795 IPR008271 GO:0004672|GO:0006468
Pral3839g00004 983 Gene3D Transferase(Phosphotransferase) domain 1 111 305 - -
Pral3839g00004 983 Gene3D Phosphorylase Kinase; domain 1 5 110 - -
Pral3839g00004 983 Gene3D Phosphorylase Kinase; domain 1 629 735 - -
Pral3839g00004 983 ProSiteProfiles Protein kinase domain profile. 661 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3839g00004 983 Pfam Wall-associated receptor kinase galacturonan-binding 359 422 IPR025287 GO:0030247
Pral3839g00004 983 FunFam PR5-like receptor kinase 736 946 - -
Pral3839g00004 983 Pfam Protein kinase domain 664 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3839g00004 983 Pfam Protein kinase domain 41 239 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3839g00004 983 FunFam serine/threonine-protein kinase PBS1-like 631 735 - -
Pral3839g00004 983 ProSitePatterns Protein kinases ATP-binding region signature. 667 689 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3839g00004 Pral-Chr3839 78558 92167 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3839g00004 340 962 Receptor kinase-like Gene Family AT1G66910 39.454 1.04e-138 429
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral3839g00004 Pkinase 8.7e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3839g00004 - - itr:116020413 810.831