Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3839g00003 ATGACCAACTCTTTCAGAGATAAATTAGGACAAGGTGGTTATGGTTCTGTATACAAAGGAAAACTCCTCAATGGCCACCCTATTGCTGTAAAGTTATTGAAGGCATCAAAAGAGAACAAGGAAGAATTTATCAATGAGGTTGCCAGCAGCAGTCGGACTTCCCATGTAAATGTTGTTACACTTCTTGGGTTTTGTTTTGAAGGCAAACAGAAGGCTCTCATATATGAATTTATGTCCAATGGATCTCTTGACAAGTTCATTCACAACGTAGATAAGAATAGTCTATGCCTGACTTGGGAAAATTTGTACCAAATTGCAATTGGGATAGCTCGAGGACTTGAGTATTTGCATAGAGGATGCAACACTCGAATTCTACATTTTGATATAAAGCCACATAACATCCTTTTAGATGAAAATTTTTGTCCCAAGATCTCAGATTTTGGTCTTGCTAAGCTTTGTCCTAAAAAAGAAAGCATCATTTCAATTTCAGAAGCCAGAGGAACAATAGGATATCTTGCTCCAGAAGTTTGGAATAGAAATATAGGTGGAGTTTCGTATAAGTCTGATGTTTATAGCTATGGGATGATGCTATTAGATATGGTTGGAGGGAGAAAGAACATGAATGTTGAAACCAATTGTTCAACTGAGAAATATTTCCCAGATTATATTTATGTTCAACTTGAGCAAGACAGCAATTTGGGATGTAATGGAGCTAGTAACATGGAGGAACATGATATTGCAAAGAGAATGACCATTGTGGGTTTGTGGTGCATCCAAATATTTCCAAGTCAAAGACCTACAATGAGTAGGGTGATTGAAATGTTAGAAAGAAAATTTGAGCCATTGGAAATGCCACCAAAACCTGTCATGCCTTCCCCTCCAAGATTAGAACTAGAATCTTCCACCACTGGTACTACCACAACAGAGATTTCGGGTTTTCAAAGCGCTTCCCACATGCTGCTGGAGGAACATTAG 975 0.3815 MTNSFRDKLGQGGYGSVYKGKLLNGHPIAVKLLKASKENKEEFINEVASSSRTSHVNVVTLLGFCFEGKQKALIYEFMSNGSLDKFIHNVDKNSLCLTWENLYQIAIGIARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKLCPKKESIISISEARGTIGYLAPEVWNRNIGGVSYKSDVYSYGMMLLDMVGGRKNMNVETNCSTEKYFPDYIYVQLEQDSNLGCNGASNMEEHDIAKRMTIVGLWCIQIFPSQRPTMSRVIEMLERKFEPLEMPPKPVMPSPPRLELESSTTGTTTTEISGFQSASHMLLEEH 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3839g00003 324 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Pral3839g00003 324 Gene3D Transferase(Phosphotransferase) domain 1 78 283 - -
Pral3839g00003 324 MobiDBLite consensus disorder prediction 296 315 - -
Pral3839g00003 324 Pfam Protein kinase domain 7 273 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3839g00003 324 ProSiteProfiles Protein kinase domain profile. 3 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3839g00003 324 Gene3D Phosphorylase Kinase; domain 1 1 77 - -
Pral3839g00003 324 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 297 IPR045874 GO:0004672
Pral3839g00003 324 MobiDBLite consensus disorder prediction 283 316 - -
Pral3839g00003 324 FunFam PR5-like receptor kinase 78 287 - -
Pral3839g00003 324 SMART serkin_6 3 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3839g00003 324 PIRSF ILK 3 284 - -
Pral3839g00003 324 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pral3839g00003 324 SUPERFAMILY Protein kinase-like (PK-like) 5 276 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3839g00003 Pral-Chr3839 61314 73850 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3839g00003 1 303 Receptor kinase-like Gene Family AT1G66910 57.190 1.27e-120 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral3839g00003 Pkinase 3.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3839g00003 - - pcin:129304394 475.707