Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3839g00002 ATGACCAAGTCTTTCAAAGATAAATTAGGACAGGGTGGTTATAGTTCTGTATACAAAGGAAAACTCCTTGATGGCCGCCCTGTTGCTGTAAAGTTATTGAAGGCATCAAGAGAGAATGGAGAAGACTTTATCAATGAGGTTGCCAGCATTAGTGGGACTTCCCATGTAAATGTTGCTACACTTCTTGGGTTTTGTTTTGAAGGCAAAAAGAAGGCTCTCATATATGAATTTATGTCCAATGGATCGCTTGACAAATTCATTTACAACAATGCAGAAAAAACTAGTCTATGGTTGACTTCAGAAAATTTGTACCAAATTGCAATTGGGATAGCTCGAGGACTTGAGTATTTGCATAGAGGATGCAACACTCGAATCTTGCATTTTGATATAAAGCCCCATAACATCCTTTTAGATGAAAACTTTTGTCCCAAGATCTCAGATTTTGGTCTTGCTAAGCTTTGTCCTAAAAAAGAAAGCACCATTTCAATTTCAGAAGCCAGAGGAACAATAGGATATCTTGCTCCGGAAGTCTGGAATAGAAACATAGGTGGAGTTTCAAATAAGTCTGATGTTTATAGCTATGGGATGATGCTATTAGATATGGTTGGAGGGAGAAAGAACATGAATGTTGAAACCAATTGTTCGACTGAGAAATATTTTCCAGATTATATTTATGTTCAACTTGAGCAAGACAGCAATTTGGGATATAATGGGGCCAATAACGCAGGGGAAAATGATATTGCAAAGAGAATGACCATTGTGGCTTTGTGGTGCATCCAAACATTTCCAAGTCAAAGACCTACAATGAGTAGAGTGATTGAAATGTTAGAAAGAAGATGGGATCTGTTGGAAATGCCACCAAAACCTATCATGCCTTCCCTTCCAAGATTAGAACTAGAATCTTCCATCACTACTACTACCACCACAACAGAGATTTTGGGTTTTCAAAGTGCTTCCCACATGCTACTGGAGGAACACTAG 981 0.3833 MTKSFKDKLGQGGYSSVYKGKLLDGRPVAVKLLKASRENGEDFINEVASISGTSHVNVATLLGFCFEGKKKALIYEFMSNGSLDKFIYNNAEKTSLWLTSENLYQIAIGIARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKLCPKKESTISISEARGTIGYLAPEVWNRNIGGVSNKSDVYSYGMMLLDMVGGRKNMNVETNCSTEKYFPDYIYVQLEQDSNLGYNGANNAGENDIAKRMTIVALWCIQTFPSQRPTMSRVIEMLERRWDLLEMPPKPIMPSLPRLELESSITTTTTTTEILGFQSASHMLLEEH 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3839g00002 326 PIRSF ILK 3 284 - -
Pral3839g00002 326 Pfam Protein kinase domain 6 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3839g00002 326 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524
Pral3839g00002 326 ProSitePatterns Serine/Threonine protein kinases active-site signature. 125 137 IPR008271 GO:0004672|GO:0006468
Pral3839g00002 326 ProSiteProfiles Protein kinase domain profile. 3 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3839g00002 326 SUPERFAMILY Protein kinase-like (PK-like) 5 277 IPR011009 -
Pral3839g00002 326 Gene3D Transferase(Phosphotransferase) domain 1 78 283 - -
Pral3839g00002 326 SMART serkin_6 3 276 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3839g00002 326 FunFam PR5-like receptor kinase 78 288 - -
Pral3839g00002 326 PANTHER RUST RESISTANCE KINASE LR10-RELATED 1 298 IPR045874 GO:0004672
Pral3839g00002 326 Gene3D Phosphorylase Kinase; domain 1 1 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3839g00002 Pral-Chr3839 49902 50897 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3839g00002 1 304 Receptor kinase-like Gene Family AT1G66910 57.329 1.76e-120 359
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral3839g00002 Pkinase 3.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3839g00002 - - pcin:129304394 472.241