Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3828g00006 ATGACGACGCTCCACCCGGGGGAGTTCGACGCTGACTCCGTCGCTTCCTCCCCTCGTTCCGACCATTTTCATGAACCTTTGCTTCGCGTCCGCTTCATGTGCAGCTTCGGTGGCAGGATATTGCCCCGCCCCCACGACAACCAGCTCCGCTACGTCGGTGGTGACACCAGAATGATCGCGGTCCACCGCTCTATCTCCTTCTCAGCTCTCCTTCTCAGGCTTTCTAAGCTCTCAGGCACCACCAATATAACAGTGAAGTACCAGCTTCCCAATGAGGATCTGGACGCCCTGATTTCTGTGACGACGGACGAGGATGTGGAGAACATGATGGAGGAGTACGAGCGGGTAGCGCAGAATCAAAACCCGAGGTCAGCTCGGCTCCGGCTATTTCTGTTCGTTAAGGGAGAAGATTCTAGAGCCAATAGTATCAGCTCCCTACTGGACGGCTCTGCCAATCGCGAGAGCTGGTTTGTCGACGCCCTCAACAGCGGCGTAGGTCGGCTCGAGCGAGGCCGTTCCGAGGCGTCTTCCATGGTATCTGAAGTGCCTGATTATCTCTTCGGCCTGGAAAACTCCGACGAGGTCCAAACCCGGGAACCAAGGTTGAAACCCCGACCGCTCGTCAACGACAGCGTCTCATGTTCGGATCCTGGCTCACCCGCTCCGGTTGTTTCATCTCCGTTTTGCTCCACCTCATCGGCTCCAAATGTGCCGTCCATGCCGAACCTCCAGCCAGTTAAAACCAAACCGGATAATCCGGTTCCTGTCATGGAATCGAAAGAACATCACATTGACGGTTTTCAAACCGGAAATCCAGGTGGCCAGATGCCTCACTACCCACCGCATTCTACTTATCCTGGTCATTCTGTACAACCTTTTTCAGTTTACTACATTCCAGGTCCGGTTTCGGTTCAGCATGGGCAGGTACCAGTCCAACCGGTTACAATTCAGGGGCCTTATGTTCAGCCATACTCGGCGGTGGTGCCAGGTCAGGTGCCAGCGGGTTATCATCATATAGTTCCGGGTTCGGCCCAAGCATTCGCAGGAGGGATGAGGCCAGTCGGCGGTGCGCATTCATACGAAGCGGCTGCGAGGATTGTTTCAGACGGCGTGAGGCAGCAAGCGTATCAAGCAGTCCCGAATTACGGCAGCGCCCCTGTTTATCCGGTGATGGCGATGGCAAGTGGGGACGAAGCGCAGAGACCAGGAGCGGAACACGGCACGGGTCGGGGCCCCAACATGGAATGA 1248 0.5617 MTTLHPGEFDADSVASSPRSDHFHEPLLRVRFMCSFGGRILPRPHDNQLRYVGGDTRMIAVHRSISFSALLLRLSKLSGTTNITVKYQLPNEDLDALISVTTDEDVENMMEEYERVAQNQNPRSARLRLFLFVKGEDSRANSISSLLDGSANRESWFVDALNSGVGRLERGRSEASSMVSEVPDYLFGLENSDEVQTREPRLKPRPLVNDSVSCSDPGSPAPVVSSPFCSTSSAPNVPSMPNLQPVKTKPDNPVPVMESKEHHIDGFQTGNPGGQMPHYPPHSTYPGHSVQPFSVYYIPGPVSVQHGQVPVQPVTIQGPYVQPYSAVVPGQVPAGYHHIVPGSAQAFAGGMRPVGGAHSYEAAARIVSDGVRQQAYQAVPNYGSAPVYPVMAMASGDEAQRPGAEHGTGRGPNME 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3828g00006 415 Pfam PB1 domain 45 133 IPR000270 GO:0005515
Pral3828g00006 415 PANTHER OS05G0427100 PROTEIN-RELATED 11 356 - -
Pral3828g00006 415 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 49 134 - -
Pral3828g00006 415 SMART PB1_new 44 134 IPR000270 GO:0005515
Pral3828g00006 415 Gene3D - 50 134 - -
Pral3828g00006 415 SUPERFAMILY CAD & PB1 domains 45 140 - -
Pral3828g00006 415 CDD PB1_UP2 33 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3828g00006 Pral-Chr3828 61306 63091 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3828g00006 19 132 MAP Kinase Kinase Kinase AT3G46920 47.368 2.46e-31 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3828g00006 - - gmx:100806717 514.998