Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3828g00005 ATGGAGTTTGATCTTGAAGACCCACTTGCCAGCTTTGAAGAACAGCAAAACTGTAGCATCTCTGAACTCTTTGCCTGTGAATCTGATCATATGCCCACTCAAAATTGCATTTCCTTCCGTTGTGAAGCTGTTTCTCTCATATCACAGGTTCAGTTTTCCAGCAATTTGGACCCTTTAGGAACTTACCTTGCTATAAATTACTTGGACCGGTTCGTGTCCAGGCGAGAAATAAAGAAGGGGAAGCCGTGGTTTCTCAGACTCATTGTTATCTCTTGTCTTTCTCTGGCCTCAAAAATGACCAACACACCCTTCCCAATTTCAGATTTGCAGATTGAAGGTTGTATGTTTGAGGCTGGAACTATTCAGAAAATGGAGAATCTTATACTTGGAGCATTAGAATGGCGTATGAGATCAATTACACCTTTTTCTTTTCTGCATTTCTTCATCTCTTTAGCTGAGATTGAACTCAAAGACCCATCATCAAAACAAGCACTGAAAGAGAGAGCTTCAGAGATAATCTTTAATGCTCATTATGACATCAAATTTGTGGGGTTCAAACCTTCCACTGTCGCAGCATCTGCACTTATTTGTGCATCTGGTGAGCTATTCCCACAGCAATTTTCTACTGTGAGGGCTTCAATTGTAGCTTGTGATTATATTGATGAGGACACAGTAAGTAGGTGCTTCAGTTTGATGCAAGAGATGAAGAGGATGGAGGCAAAAGACTCAGCCTTTGACTATGATACGAGCTTTATAAGCACAGAAACTTCAGTGAGCACCGTCTGA 786 0.4109 MEFDLEDPLASFEEQQNCSISELFACESDHMPTQNCISFRCEAVSLISQVQFSSNLDPLGTYLAINYLDRFVSRREIKKGKPWFLRLIVISCLSLASKMTNTPFPISDLQIEGCMFEAGTIQKMENLILGALEWRMRSITPFSFLHFFISLAEIELKDPSSKQALKERASEIIFNAHYDIKFVGFKPSTVAASALICASGELFPQQFSTVRASIVACDYIDEDTVSRCFSLMQEMKRMEAKDSAFDYDTSFISTETSVSTV 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3828g00005 261 Gene3D - 33 137 - -
Pral3828g00005 261 PANTHER CYCLINS 28 236 IPR039361 -
Pral3828g00005 261 SMART cyclin_7 45 130 IPR013763 -
Pral3828g00005 261 Pfam Cyclin, N-terminal domain 30 136 IPR006671 -
Pral3828g00005 261 FunFam D6-type cyclin 135 230 - -
Pral3828g00005 261 Pfam Cyclin, C-terminal domain 139 236 IPR004367 -
Pral3828g00005 261 SUPERFAMILY Cyclin-like 20 136 IPR036915 -
Pral3828g00005 261 Gene3D - 26 229 - -
Pral3828g00005 261 CDD CYCLIN_AtCycD-like_rpt2 139 232 - -
Pral3828g00005 261 SUPERFAMILY Cyclin-like 121 236 IPR036915 -
Pral3828g00005 261 SMART Cyclin_C_2 139 258 IPR004367 -
Pral3828g00005 261 FunFam D6-type cyclin 28 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3828g00005 Pral-Chr3828 55132 56599 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3828g00005 1 261 Core Cell Cycle Gene Families AT4G03270 40.714 3.28e-61 193
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3828g00005 K18812 - gmx:100799763 334.339