Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3828g00002 ATGGAGAGCGCACACACTCTTCCACTCTTTCCGCTCTCCTTCGTCACCTTCTTCATCCTCTGTTTTCTCGCTCTGTTTTCCCATGCTGCCATTTTCAATTCAATCACTCAGGGCCAGTTGATCAGAGACGGCGACACAGTCGTATCAAATGGACTCAATTTCGAGTTGGGTTTCTTCAGTCCCCAAGATTCCCCTGTGCGATACGTCGGGATTTGGTACAGCGTCCCCGGACCGTCGGTGATATGGGTTGCGAACAGAGGAAACCCAATTAAAGACAAGGAAGGGGCTATAACAATTAGCAGAGATGGCAACTTGGTCATCTTGGACGGGCAAAACAACACAGTCTGGTCCAGTAACGTGTCAATCCCAATCCCGAGAAACAAGTCGAAGGCTTTTCTCCGGGACGACGGAAACCTTATTCTTTCGAGTAGCCCTACTAACAGGAAGTTGTGGAAGAGCTTTGAGCATCCAACAGATACATTTCTACCTGGTATGATTGTTCCAGTAAATGAAACAATGGGAGAGGTACGTACTTTTGTGTCTTGGAAATCTGCTGATAATCCTTCACCAGGGAACTACACAATGGGACTCGATCCTCGTGCAGCACTCCAGATAGTGATTTGGGAAGGAAGCAAAAGGAGATGGAGAAGTGGGTATTGGGATGGTAGAATATTCACAGGTGTGTCAAACATGACCAGCAGTTATCTTTATGGTTTTAGACTCAATGTGAATGATGACCAAACCAGGTACTTAACATATAATCCACTGAACAGTTCTGAAAAGGTCAGGTTTCAGATAGGCTGGGATGGGACTGAAAGGGAGCTCATTTGGGATGAAGGCGAGAGAAAGTGGACTACTGTGGAAAGGGAGCCATATAATGATTGTGACCTGTATAACAAGTGTGGGAATTTTGGGGTATGCTGTTTATCCACTTCACCGATCTGTAATTGCTTAAAGGGATTTGAGCCAAAGGATTGGGATCAGTGGCAGAAAGGGAACTGGTCGGGTGGGTGTAAAAGGAGAACCCCACTAAAGAATGAGATCAAAGCTAGTAATGGAACAGACAAAAATGTTAAGGATGATGGATTCTTGATGATTAGGTGTATGAAATTGCCTGATTTTGTAAATTTGGTGGCTGATAGGAACTCTGGCATTGATACTACCAAAGAGAATTGTGAGAATCGCTGTGTTTCGGATAGTAATTGTACTGCTTATGCTTATGTTATTGGGATCGGGTGCATGATTTGGCATGGGGAGTTAGTTGATATTGACCACTTTGGAAAGGGAGGAAACACGTTGTTCATCCGCCTTGCTGCTTCTGAATTAGGCAATAGGAGTAAAAAGACTGAGATAATGATAATAGCATCGGTTGTAGCAGGAGTAATCTGCCTAGGACTGTGCGTGTGGCTAGCATATATATTTCAAAGAAAAAGCAAAGGAGGCAAGAATGATAATGTACCCATATTTGTTACAAATAAGAGTAGAGATTCTTCAGTAGATGTTTCCGGATCAACTGAGTTTAGTTTGGAAGGGAATCAACTAAGCGGGCCAGAATTACCATTCTTCAATTTCAATTGCATCGCAATAGCCACTAACAATTTCTCAGAAGAGAATAAGCTCGGAGAGGGGGGATTTGGTCCTGTCTACAAGGGAAAGCTTCCAGGGGGAGAAGAAATAGCAGTCAAGAGACTTTCAAGATGTTCAGGCCAAGGATTAGAGGAGTTCAAAAATGAGATGGTGCTGATAGCTAGACTACAACATAGAAATTTGGTGAGACTATGGGGATGTTCCATCCAAGAGGAGGAGAAGTTGCTGGTATATGAATACTTGCCTAACAAAAGCTTGGATTGTTATTTATTCGACCCAGTTGAGCAGAAAAAATTAGACTGGAAAAAACGATTTGAAATCATTGAAGGCATTGCAAGAGGGATACTTTATTTACACAGAGATTCTAGACTTCGAATCATTCATCGTGATCTAAAAGCAAGTAATATTTTGCTAGATGAAAATATGAATCCGAAAATTTCAGATTTTGGCTTGGCCAGAATATTTGGAGGCAACCAAAACGAAGCCAATACAAATAGAGTAGTTGGCACATATGGTTATATGGCACCAGAATATGCAATGGAAGGTCTCTTTTCAGTGAAATCTGATGTTTATAGTTTTGGTGTGTTACTACTTGAGATTGTGACTGGCCGTAAGAATACAAGCTTCCGTGATAAAGATGGCCCAAGTCTGATTGGATATGCATGGAGACTCTGGAATGAAGAGAGAGGGATGGAGCTTGTGGACCCCAAAATCCGTGATTCAACACCAAGAAGGAAAGCTTTGAGATGGATACAGATAGGGATGTTGTGTGTGCAGGATTCTGCAGGTCACAGACCAACCATGTCTACTGTGGTTCTGATGTTAGAGAGTGAAACCATGGCTCTTCCATGTCCCAGACAACCTTTGATTTGCTCGAGTTCTGAGGATGAACATGTACATATGGATGGGCCTCTTGATGCGTCCTCAAATGGTTTGACAATTACAGTGGATCTAGTCAGATAG 2550 0.4271 MESAHTLPLFPLSFVTFFILCFLALFSHAAIFNSITQGQLIRDGDTVVSNGLNFELGFFSPQDSPVRYVGIWYSVPGPSVIWVANRGNPIKDKEGAITISRDGNLVILDGQNNTVWSSNVSIPIPRNKSKAFLRDDGNLILSSSPTNRKLWKSFEHPTDTFLPGMIVPVNETMGEVRTFVSWKSADNPSPGNYTMGLDPRAALQIVIWEGSKRRWRSGYWDGRIFTGVSNMTSSYLYGFRLNVNDDQTRYLTYNPLNSSEKVRFQIGWDGTERELIWDEGERKWTTVEREPYNDCDLYNKCGNFGVCCLSTSPICNCLKGFEPKDWDQWQKGNWSGGCKRRTPLKNEIKASNGTDKNVKDDGFLMIRCMKLPDFVNLVADRNSGIDTTKENCENRCVSDSNCTAYAYVIGIGCMIWHGELVDIDHFGKGGNTLFIRLAASELGNRSKKTEIMIIASVVAGVICLGLCVWLAYIFQRKSKGGKNDNVPIFVTNKSRDSSVDVSGSTEFSLEGNQLSGPELPFFNFNCIAIATNNFSEENKLGEGGFGPVYKGKLPGGEEIAVKRLSRCSGQGLEEFKNEMVLIARLQHRNLVRLWGCSIQEEEKLLVYEYLPNKSLDCYLFDPVEQKKLDWKKRFEIIEGIARGILYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQNEANTNRVVGTYGYMAPEYAMEGLFSVKSDVYSFGVLLLEIVTGRKNTSFRDKDGPSLIGYAWRLWNEERGMELVDPKIRDSTPRRKALRWIQIGMLCVQDSAGHRPTMSTVVLMLESETMALPCPRQPLICSSSEDEHVHMDGPLDASSNGLTITVDLVR 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3828g00002 849 SMART blect_4 38 157 IPR001480 -
Pral3828g00002 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 655 667 IPR008271 GO:0004672|GO:0006468
Pral3828g00002 849 SMART serkin_6 534 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3828g00002 849 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 610 812 - -
Pral3828g00002 849 Pfam Protein tyrosine and serine/threonine kinase 537 802 IPR001245 GO:0004672|GO:0006468
Pral3828g00002 849 Pfam S-locus glycoprotein domain 215 324 IPR000858 GO:0048544
Pral3828g00002 849 CDD STKc_IRAK 540 805 - -
Pral3828g00002 849 SMART ntp_6 358 437 IPR003609 -
Pral3828g00002 849 Pfam PAN-like domain 359 423 IPR003609 -
Pral3828g00002 849 Gene3D Phosphorylase Kinase; domain 1 499 609 - -
Pral3828g00002 849 Gene3D Transferase(Phosphotransferase) domain 1 610 811 - -
Pral3828g00002 849 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 795 - -
Pral3828g00002 849 ProSiteProfiles Protein kinase domain profile. 534 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3828g00002 849 Pfam D-mannose binding lectin 80 183 IPR001480 -
Pral3828g00002 849 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 154 - -
Pral3828g00002 849 ProSiteProfiles PAN/Apple domain profile. 358 439 IPR003609 -
Pral3828g00002 849 CDD B_lectin 39 157 IPR001480 -
Pral3828g00002 849 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 500 609 - -
Pral3828g00002 849 PIRSF SRK 3 846 IPR024171 GO:0004674
Pral3828g00002 849 ProSiteProfiles Bulb-type lectin domain profile. 32 154 IPR001480 -
Pral3828g00002 849 CDD PAN_AP_plant 355 438 - -
Pral3828g00002 849 Gene3D - 28 154 IPR036426 -
Pral3828g00002 849 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 188 IPR036426 -
Pral3828g00002 849 SUPERFAMILY Protein kinase-like (PK-like) 519 827 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3828g00002 Pral-Chr3828 10943 15156 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3828g00002 437 817 Receptor kinase-like Gene Family AT4G23230 51.571 2.09e-129 399
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3828g00002 PK_Tyr_Ser-Thr 4.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3828g00002 - - pcin:129285104 1108.2