Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3828g00001 ATGGAGAGCGCACACACTCTTCCACTCTTTCCGCTCTCCTTCGTCACCTTCTTCATCCTCTGTTTTCTCGCTCTGTTTTCCCATGCTGCCATTTTCAATTCAATCACTCAGGGCCAGTTGATCAGAGACGGCGACACAGTCGTATCAAATGGACTCAATTTCGAGTTGGGTTTCTTCAGTCCCCAAGATTCCCCTGTGCGATACGTCGGGATTTGGTACAGCGTCCCCGGACCGTCGGTGATATGGGTTGCGAACAGAGGAAACCCAATTAAAGACAAGGAAGGGGCTATAACAATTAGCAGAGATGGCAACTTGGTCATCTTGGACGGGCAAAACAACACAGTCTGGTCCAGTAACGTGTCAATCCCAATCCCGAGAAACAAGTCGAAGGCTTTTCTCCGGGACGACGGAAACCTTATTCTTTCGAGTAGCCCTACTAACAGGAAGTTGTGGAAGAGCTTTGAGCATCCAACAGATACATTTCTACCTGGTATGATTGTTCCAGTAAATGAAACAATGGGAGAGGTACGTACTTTTGTGTCTTGGAAATCTGCTGATAATCCTTCACCAGGGAACTACACAATGGGACTCGATCCTCGTGCAGCACTCCAGATAGTGATTTGGGAAGGAAGCAAAAGGAGATGGAGAAGTGGGTATTGGGATGGTAGAATATTCACAGGTGTGTCAAACATGACCAGCAGTTATCTTTATGGTTTTAGACTCAATGTGAATGATGACCAAACCAGGTACTTAACATATAATCCACTGAACAGTTCTGAAAAGGTCAGGTTTCAGATAGGCTGGGATGGGACTGAAAGGGAGCTCATTTGGGATGAAGGCGAGAGAAAGTGGACTACTGTGGAAAGGGAGCCATATAATGATTGTGACCTGTATAACAAGTGTGGGAATTTTGGGGTATGCTGTTTATCCACTTCACCGATCTGTAATTGCTTAAAGGGATTTGAGCCAAAGGATTGGGATCAGTGGCAGAAAGGGAACTGGTCGGGTGGGTGTAAAAGGAGAACCCCACTAAAGAATGAGATCAAAGCTAGTAATGGAACAGACAAAAATGTTAAGGATGATGGATTCTTGATGATTAGGTGTATGAAATTGCCTGATTTTGTAAATTTGGTGGCTGATAGGAACTCTGGCATTGATACTACCAAAGAGAATTGTGAGAATCGCTGTGTTTCGGATAGTAATTGTACTGCTTATGCTTATGTTATTGGGATCGGGTGCATGATTTGGCATGGGGAGTTAGTTGATATTGACCACTTTGGAAAGGGAGGAAACACGTTGTTCATCCGCCTTGCTGCTTCTGAATTAGGCAATAGGAGTAAAAAGACTGAGATAATGATAATAGCATCGGTTGTAGCAGGAGTAATCTGCCTAGGACTGTGCGTGTGGCTAGCATATATATTTCAAAGAAAAAGCAAAGCTTCAGGAGGCAAGAATGATAATGTACCCATATTTGTTACAAATAAGAGTAGAGATTCTTCAGTAGATGTTTCCGGATCAACTGAGTTTAGTTTGGAAGGGAATCAACTAAGCGGGCCAGAATTACCATTCTTCAATTTCAATTGCATCGCAATAGCCACTAACAATTTCTCAGAAGAGAATAAGCTCGGAGAGGGGGGATTTGGTCCTGTCTACAAGGGAAAGCTTCCAGGGGGAGAAGAAATAGCAGTCAAGAGACTTTCAAGATGTTCAGGCCAAGGATTAGAGGAGTTCAAAAATGAGATGGTGCTGATAGCTAGACTACAACATAGAAATTTGGTGAGACTATGGGGATGTTCCATCCAAGAGGAGGAGAAGTTGCTGGTATATGAATACTTGCCTAACAAAAGCTTGGATTGTTATTTATTCGACCCAGTTGAGCAGAAAAAATTAGACTGGAAAAAACGATTTGAAATCATTGAAGGCATTGCAAGAGGGATACTTTATTTACACAGAGATTCTAGACTTCGAATCATTCATCGTGATCTAAAAGCAAGTAATATTTTGCTAGATGAAAATATGAATCCGAAAATTTCAGATTTTGGCTTGGCCAGAATATTTGGAGGCAACCAAAACGAAGCCAATACAAATAGAGTAGTTGGCACATATGGTTATATGGCACCAGAATATGCAATGGAAGGTCTCTTTTCAGTGAAATCTGATGTTTATAGTTTTGGTGTGTTACTACTTGAGATTGTGACTGGCCGTAAGAATACAAGCTTCCGTGATAAAGATGGCCCAAGTCTGATTGGATATGCATGGAGACTCTGGAATGAAGAGAGAGGGATGGAGCTTGTGGACCCCAAAATCCGTGATTCAACACCAAGAAGGAAAGCTTTGAGATGGATACAGATAGGGATGTTGTGTGTGCAGGATTCTGCAGGTCACAGACCAACCATGTCTACTGTGGTTCTGATGTTAGAGAGTGAAACCATGGCTCTTCCATGTCCCAGACAACCTTTGATTTGCTCGAGTTCTGAGGATGAACATGTACATATGGATGGGCCTCTTGATGCGTCCTCAAATGGTTTGACAATTACAGTGGATCTAGTCAGATAG 2556 0.4272 MESAHTLPLFPLSFVTFFILCFLALFSHAAIFNSITQGQLIRDGDTVVSNGLNFELGFFSPQDSPVRYVGIWYSVPGPSVIWVANRGNPIKDKEGAITISRDGNLVILDGQNNTVWSSNVSIPIPRNKSKAFLRDDGNLILSSSPTNRKLWKSFEHPTDTFLPGMIVPVNETMGEVRTFVSWKSADNPSPGNYTMGLDPRAALQIVIWEGSKRRWRSGYWDGRIFTGVSNMTSSYLYGFRLNVNDDQTRYLTYNPLNSSEKVRFQIGWDGTERELIWDEGERKWTTVEREPYNDCDLYNKCGNFGVCCLSTSPICNCLKGFEPKDWDQWQKGNWSGGCKRRTPLKNEIKASNGTDKNVKDDGFLMIRCMKLPDFVNLVADRNSGIDTTKENCENRCVSDSNCTAYAYVIGIGCMIWHGELVDIDHFGKGGNTLFIRLAASELGNRSKKTEIMIIASVVAGVICLGLCVWLAYIFQRKSKASGGKNDNVPIFVTNKSRDSSVDVSGSTEFSLEGNQLSGPELPFFNFNCIAIATNNFSEENKLGEGGFGPVYKGKLPGGEEIAVKRLSRCSGQGLEEFKNEMVLIARLQHRNLVRLWGCSIQEEEKLLVYEYLPNKSLDCYLFDPVEQKKLDWKKRFEIIEGIARGILYLHRDSRLRIIHRDLKASNILLDENMNPKISDFGLARIFGGNQNEANTNRVVGTYGYMAPEYAMEGLFSVKSDVYSFGVLLLEIVTGRKNTSFRDKDGPSLIGYAWRLWNEERGMELVDPKIRDSTPRRKALRWIQIGMLCVQDSAGHRPTMSTVVLMLESETMALPCPRQPLICSSSEDEHVHMDGPLDASSNGLTITVDLVR 851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3828g00001 851 SMART blect_4 38 157 IPR001480 -
Pral3828g00001 851 Gene3D Transferase(Phosphotransferase) domain 1 612 813 - -
Pral3828g00001 851 Gene3D Phosphorylase Kinase; domain 1 501 611 - -
Pral3828g00001 851 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 502 611 - -
Pral3828g00001 851 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 797 - -
Pral3828g00001 851 Pfam S-locus glycoprotein domain 215 324 IPR000858 GO:0048544
Pral3828g00001 851 Pfam Protein tyrosine and serine/threonine kinase 539 804 IPR001245 GO:0004672|GO:0006468
Pral3828g00001 851 SMART ntp_6 358 437 IPR003609 -
Pral3828g00001 851 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 612 814 - -
Pral3828g00001 851 Pfam PAN-like domain 359 423 IPR003609 -
Pral3828g00001 851 Pfam D-mannose binding lectin 80 183 IPR001480 -
Pral3828g00001 851 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 27 154 - -
Pral3828g00001 851 ProSiteProfiles PAN/Apple domain profile. 358 439 IPR003609 -
Pral3828g00001 851 SMART serkin_6 536 782 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3828g00001 851 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
Pral3828g00001 851 CDD B_lectin 39 157 IPR001480 -
Pral3828g00001 851 CDD STKc_IRAK 542 807 - -
Pral3828g00001 851 ProSiteProfiles Bulb-type lectin domain profile. 32 154 IPR001480 -
Pral3828g00001 851 PIRSF SRK 3 848 IPR024171 GO:0004674
Pral3828g00001 851 Gene3D - 28 154 IPR036426 -
Pral3828g00001 851 ProSiteProfiles Protein kinase domain profile. 536 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3828g00001 851 CDD PAN_AP_plant 355 438 - -
Pral3828g00001 851 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 188 IPR036426 -
Pral3828g00001 851 SUPERFAMILY Protein kinase-like (PK-like) 521 829 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3828g00001 Pral-Chr3828 10943 15233 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3828g00001 437 819 Receptor kinase-like Gene Family AT4G23230 51.562 1.49e-129 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral3828g00001 PK_Tyr_Ser-Thr 4.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3828g00001 - - pcin:129285104 1110.9