LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral3827g00019	ATGGCTACCGGAGCTTGTTTGCCGCATGAACTGCAAAGGGGTGAAAATAAGCCGAAGAATGTAGCAGTAGAAGGACGGAGTCGACGGGTTCTCCAGGATATTGGGAATCTTGTGGATGTTTCTAAGCGCATCACAAGGCAAGAAGCAGAGAAGAACAAGAAACCAAGCCTTGCAACAACGAAAGTATTAGCAGCAGGGAAGATTGTTCGCCCAGAAGGACCTGAAGTTATTACTATTAGCTCTGATGAAGAAGATAGTGAGGAAGTAAAGAAGGAAAAGAAGAAGAAAGAACCTGCTAAAGTCATAAACTCTAAACAGAACTCAACCAAGAAGAATGTGAAGACCCTCAGTGCAATCCTCTCTGCTCGAAGCAAGGCTGCTTGTGGACGTACTTACAAACCAAAGGATCAGGTGCTAGACGTTGATGCATCTGACGTGGACAATGAATTGGCAGCTGTTGAGTACATCGACGAACTCTACAAGTTCTACAAATTTGCAGAGAGTGATAGCCGTGTGTACGATTACATGGGGTCACAACCTGATGTGAATGCTAAGATGAGAGCGATTCTTGTGGACTGGTTGATAGAAGTACATCGTAAATTTGAACTCATGCCTGAAACTCTTCATCTGACTATAAACATCGTGGACCGTTTCCTTTCCTTGAAGGCTGTGTCCAGAAAGGAGCTTCAGCTGGTTGGCATCAGTTCCATGCTCATAGCCTGCAAATATGAGGAGATTTGGTCCCCAGAGGTGAATGACTTTGTGTGCATATCAGACAACGCCTATAAAAGAGAACAGGTTCTGGTGATGGAGAAAACAATCTTAAGGAAGCTAGAATGGTATTTAACTGTTCCTACACCATACGTCTTCCTTGTCCGGTATATCAAAGTCTCTTCTCCCTCTGATAAGGAGATGGAGAACATGGCGTATTTCCTAGCTGAACTTGGCCTAGTTCACTATGCCACTGTAATATTGTATAGCCCCTCTGTTATTGCTGCTTCTGCTGTGTATGCTGCTCGCTTTACCCTTGGTAGGAGCCCATTCTGGACACAGACTCTTGAACATTACACAGGCTTATCTGAGGACAAATTAAGGGAATGTGCTAAACTCATGGTGAGCTTTCACTCGCTGGCTGGTGAGAGCAAGTTGAAAGCAGTTTTCAAGAAATTCTGTAATCCAGATCGTTGTTCAGTTGCTCTTATTCCCCCAGGGAAGCTTTTGCTGGTAGAGAACGTCAGATGA	1242	0.4436	MATGACLPHELQRGENKPKNVAVEGRSRRVLQDIGNLVDVSKRITRQEAEKNKKPSLATTKVLAAGKIVRPEGPEVITISSDEEDSEEVKKEKKKKEPAKVINSKQNSTKKNVKTLSAILSARSKAACGRTYKPKDQVLDVDASDVDNELAAVEYIDELYKFYKFAESDSRVYDYMGSQPDVNAKMRAILVDWLIEVHRKFELMPETLHLTINIVDRFLSLKAVSRKELQLVGISSMLIACKYEEIWSPEVNDFVCISDNAYKREQVLVMEKTILRKLEWYLTVPTPYVFLVRYIKVSSPSDKEMENMAYFLAELGLVHYATVILYSPSVIAASAVYAARFTLGRSPFWTQTLEHYTGLSEDKLRECAKLMVSFHSLAGESKLKAVFKKFCNPDRCSVALIPPGKLLLVENVR	413

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral3827g00019	413	CDD	CYCLIN_AtCycB-like_rpt1	135	280	-	-
	Pral3827g00019	413	PIRSF	Cyclin_A_B_D_E	7	413	IPR046965	GO:0016538\|GO:0044772
	Pral3827g00019	413	SUPERFAMILY	Cyclin-like	147	282	IPR036915	-
	Pral3827g00019	413	SUPERFAMILY	Cyclin-like	284	405	IPR036915	-
	Pral3827g00019	413	PANTHER	CYCLINS	97	384	IPR039361	-
	Pral3827g00019	413	Pfam	Cyclin, N-terminal domain	170	282	IPR006671	-
	Pral3827g00019	413	FunFam	G2/mitotic-specific cyclin-1	273	399	-	-
	Pral3827g00019	413	MobiDBLite	consensus disorder prediction	1	24	-	-
	Pral3827g00019	413	Pfam	Cyclin, C-terminal domain	285	402	IPR004367	-
	Pral3827g00019	413	SMART	cyclin_7	192	276	IPR013763	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral3827g00019	Pral-Chr3827	147785	150622	Transposed

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral3827g00019	7	402	Core Cell Cycle Gene Families	AT2G26760	54.250	2.19e-146	419

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral3827g00019	K21777		-	qsa:O6P43_014681	503.056

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