Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3823g00008 ATGGAGAAAAATAAGAAAAGGAGGCTTAAAACGCCGGCCCAGGTGATGGCCCTGGAAAAATTTTATGATGAGCACAAATATCCCACAGAAGAAATGAAATCAGAACTTGCTGAGGAGTTAGGCTTGACTGAAAAGCAAGTATCTGGATGGTTTTGCCACAGACGGTTAAAAGATAAAAGATTGCTGAAAGATGAAACATGTGCTAATGGACGACAAGATCGTTCAAGTGGTGTGATCCAGGACCGTGTAAGTGGGCTAGGGCAAGATTCATGTGGAAGCACTAAACATGGTGATTATAAGCATCTTGATCTGAAAGAGGTTGAGAGTCATGGCCTCTATGGCAATGACTTTTCTGCTGCAGATATGACGTATGAAGGTAATAGACACTGTGATGAAGATGATGGTGGAACAGATAACACATCTTCTGAGAGCAGCTCATCTTTACAAGATCAGTTGTTCTCTCAAGGTCAGGATCCATATAATGTGGAGCCTTCTAGATATCTGACGGCTAACAGAGCTCTGCCACCTTTAGTTCCCAAAGCTGCAATTAACATTGGATATAAACCGTCAGGATATTTGAAAGTGAAGGGTGAGATAGAGAATGCTGCTATAACTGCTGTCAAGAAGCAATTAGGAAGGAACTATCGGGAAGATGGTCCACTGCTTAGTGTAGAATTTGATCCAGTTCCTCCGGGGGCATTAGAGTGTCAAATTGCAGATCCAGTTGATGAATCATTCCGTACTGTGAATCCTTCTCTTGGCAGTCCTCCAGAGATAGCTGGCGTGAAAAGGCAACCCGCACATAACTCTAGGTATGACTCCAAATATAGTTCCCATGATCTACATATGGAAGTAGGAGATCTTGGCTCCTTGCATGACACTGATTTGCTGGATAAGAAACCCCACCGGCACAAGCAAGGGCGGACATTGCAGAGTTATACCAATCATTTACCTCGGAGGAACTCCTCCCTGGAGTTTTATGAAGATCCCACTGAAGAAGTGCCTGTTTATAATACAATGGGCTCTAAGCATGGTGAAGGAATGAGATCTGATTCTGCTTCTAACCATAGTGATCACTTTGAAGAGGACCTTGTAGTTAAGCAGACAGATTCACTTCTGCGTTGCTATGATAATGTCAATCCAAAGAAAATTCAGAAGGGTGAACATGTGAAATCTAAGCCTTCAAATTCATTAAAAAAGTCTCGCATTTCTCTTGGTACTGAAGAAAGAGGACTAACTCCAAGGATAGCAAAGGAAGAGAAGTTTAGTGGAGACAAGAAGGCAAGAAAACAATATCATGATTCAGAGAGAATAAGGATTCTTTCAAATGAAACCATGATTGCAAAAAGAGTTAAAGATGATCTTCCTCAACAACACAATCTGAAACATGCACTAGTAGCTGAGATGCAACCTCAGAAAAATCGGAGGTCTGCAACAGAGATGCTTTCTAGCTTTAGTGAGGATGAAACCGCTGAAACCGGTTCTTCGCTGGACTAA 1497 0.4202 MEKNKKRRLKTPAQVMALEKFYDEHKYPTEEMKSELAEELGLTEKQVSGWFCHRRLKDKRLLKDETCANGRQDRSSGVIQDRVSGLGQDSCGSTKHGDYKHLDLKEVESHGLYGNDFSAADMTYEGNRHCDEDDGGTDNTSSESSSSLQDQLFSQGQDPYNVEPSRYLTANRALPPLVPKAAINIGYKPSGYLKVKGEIENAAITAVKKQLGRNYREDGPLLSVEFDPVPPGALECQIADPVDESFRTVNPSLGSPPEIAGVKRQPAHNSRYDSKYSSHDLHMEVGDLGSLHDTDLLDKKPHRHKQGRTLQSYTNHLPRRNSSLEFYEDPTEEVPVYNTMGSKHGEGMRSDSASNHSDHFEEDLVVKQTDSLLRCYDNVNPKKIQKGEHVKSKPSNSLKKSRISLGTEERGLTPRIAKEEKFSGDKKARKQYHDSERIRILSNETMIAKRVKDDLPQQHNLKHALVAEMQPQKNRRSATEMLSSFSEDETAETGSSLD 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3823g00008 498 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 498 - -
Pral3823g00008 498 Gene3D - 1 77 - -
Pral3823g00008 498 MobiDBLite consensus disorder prediction 125 163 - -
Pral3823g00008 498 MobiDBLite consensus disorder prediction 467 498 - -
Pral3823g00008 498 ProSiteProfiles 'Homeobox' domain profile. 1 61 IPR001356 GO:0003677
Pral3823g00008 498 MobiDBLite consensus disorder prediction 71 91 - -
Pral3823g00008 498 MobiDBLite consensus disorder prediction 139 163 - -
Pral3823g00008 498 SUPERFAMILY Homeodomain-like 3 69 IPR009057 -
Pral3823g00008 498 MobiDBLite consensus disorder prediction 472 498 - -
Pral3823g00008 498 Pfam Homeodomain 5 60 IPR001356 GO:0003677
Pral3823g00008 498 MobiDBLite consensus disorder prediction 386 408 - -
Pral3823g00008 498 MobiDBLite consensus disorder prediction 65 95 - -
Pral3823g00008 498 CDD homeodomain 5 60 IPR001356 GO:0003677
Pral3823g00008 498 SMART HOX_1 3 65 IPR001356 GO:0003677
Pral3823g00008 498 MobiDBLite consensus disorder prediction 252 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3823g00008 Pral-Chr3823 67508 74153 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3823g00008 2 498 Homeobox Transcription Factor Family AT4G03250 41.300 6.02e-79 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Pral3823g00008 Homeodomain 8.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3823g00008 - - gmx:100803515 628.632