LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral3822g00009	ATGAACAAGCAGTATTGCAAAGCTTTCATTTCTCTGTTCTTCATTCTTCTTTCATTCCTCACACTTATTTCCTCAGTAACATGTGATGATACGAAGACTTACATCGTCTACTTGGGATCACTTCCTAAGCAATCATCTTCTTATTCTCCAACCTCACACCACCTCACAATTCTTCAACAAGTTATTGATGGAGCTGTCGTCAATGCAAGTTCTTGCTTGGTTCGAAGTTACAGTAAGAGCTTCAATGGCTTTGCTGCAAAACTCACCAGTGATCAAAGAGACAAGATAGCTGACATGGACGAGGTGGTCTCTGTGTTTGAAAGCAAAACTCTCAGAATTCAGACGACAAGATCATGGGACTTCATGGGATTCGTCGAGAAGGCTATAAAGCGAAACTCTTCAGCTGAGAGTGATGTTGTGGTCGGACTCATAGACACCGGAATATGGCCGGAGTCGGAGAGTTTCAGCGACGAAGGTCTCGGCGGTGTTCCTGAGAAATGGAGAGGGACTTGTGCTGGCGGCAAGAACTTCACCTGCAACAAGAAGATCGTTGGAGCTCGGTACTATCCTGTAACTAGTGATTCTGCCAGAGATGAAGAAGGCCATGGAACCCACACTGCCTCTATAGCAGCTGGGAACATAGTTCATGGAGTCAGCTTTTATGGGATAGCAAATGGTACAGCAAGAGGAGGAGTTCCTTCTGCGAGGATAGCTACCTATGCAGCTTGTGATAAACTAGGAAATTGTCCAGACGAAGATATCTTGTCTTCTTTTGATGACGCCATTTCAGATGGCGTTCACATCATTTCAGTGTCACTATCAAGCGCAGGTCCTAGGGATTTAACCGATGATCCAATAGCCATAGGATCTTTCCACGCTATGGAGAAAGGGATCCTCACCGTCCAAGCTGCCGGCAACTATGGTCCTTCATTTGGCTCAGTTTCAAGTGTGGCACCATGGATCCTAGCTGTAGCAGCAAGCACTACAGATCGTAAAATCATCGACAAACTTGTTCTTGGGAATGGACACACACTGATTGGGAATTCCATAAATGCTTTTGGTTCAAATGGTACGATGTTTCCTATAGCTAAGGTAAATGGTGATTCAAAAAGTTGTGCAAAAGATTTTCAAAGATTTTGTTCTTGTTTTGACACAAACCTGGTAAAAGGGAAGATTGTGCTGTGTCGTGATCGTCCTCTGTTTACGTTTAACTCTAATGCTAAGTCTCAAGGTATAGTTGGCGTCATCACAGCTTCACTTTTCCGAATTGAAGATGTCTCAGAAGTTGTGTCACTACCTTCATTAGACATTTCCAAAGACTCTTTCGACATTGTCGTGTCCTACATAAATTCAACCCACGATCCAAAAGCTGAGATAAAGAGGAGTGAGATTTGTGTAGATAAAATGGCTCCAAGAACAATTGATTTCTCTGCACGTGGGCCAAATTTCTATGTAGCAGAGATCTTAAAGCCGGATATAAGTGCTCCTGGAGTTGATATTTTGGCTGCATATTCACCTGTTGCACCTGTTTCAGAATTTGCAGATGAAAACAGATCTGTCAAATACAATTTTTTGTCAGGGACTTCCATGGCTTGCCCGCATGTTTCTGGAATAGCTGCATATTTGAAGACCCTTCATCCAGATTGGTCACCAGCGGCTATCAAATCAGCCATTTTAACAACAGCAAGACCTATGAAGAAAGCTTATTCTGATGATGCAATTGGTGAGTTTGAATATGGATCGGGGCACGTGGATCCAATACAAGCCAGTGATCCTGGGTTGGTTTATGACATATCTCAGAAAGATTATGTAGAAATGTTGTGCAATTTTGGCTATGACAGCTCTATGGTTAAGCAGATGTCTGGAGACAATAGCAGTTGTCCCAGATCTTCTCATAGAGACTTGGTCAAAAATCTGAATTATCCGCTAATGGGAGTTAATGTTAAGCCTTTTACGCCATTCAAGGTTCAGTTCAAGAGGACAGTGACAAATGTTGGATTTGCCAATTCAACCTACAAAGCAAGCATTATACCAGCATATTTGAGGTTGAATATTACAGTAAACCCTAAGGTTCTTTCCTTCAAATCGTTGAACGAGAAGAGGTCTTTCGTTGTTAGTATTACTAGCAAAAGGGGCTTCAAAAATCAAACGGCATGCACCTCATCATTGACATGGTCAGATGGGACCCACAAGGTGAGAAGCCCAATTGTTCTGATGTCGTTTAAGGAGCTCTTTTCTAGTTGA	2244	0.4251	MNKQYCKAFISLFFILLSFLTLISSVTCDDTKTYIVYLGSLPKQSSSYSPTSHHLTILQQVIDGAVVNASSCLVRSYSKSFNGFAAKLTSDQRDKIADMDEVVSVFESKTLRIQTTRSWDFMGFVEKAIKRNSSAESDVVVGLIDTGIWPESESFSDEGLGGVPEKWRGTCAGGKNFTCNKKIVGARYYPVTSDSARDEEGHGTHTASIAAGNIVHGVSFYGIANGTARGGVPSARIATYAACDKLGNCPDEDILSSFDDAISDGVHIISVSLSSAGPRDLTDDPIAIGSFHAMEKGILTVQAAGNYGPSFGSVSSVAPWILAVAASTTDRKIIDKLVLGNGHTLIGNSINAFGSNGTMFPIAKVNGDSKSCAKDFQRFCSCFDTNLVKGKIVLCRDRPLFTFNSNAKSQGIVGVITASLFRIEDVSEVVSLPSLDISKDSFDIVVSYINSTHDPKAEIKRSEICVDKMAPRTIDFSARGPNFYVAEILKPDISAPGVDILAAYSPVAPVSEFADENRSVKYNFLSGTSMACPHVSGIAAYLKTLHPDWSPAAIKSAILTTARPMKKAYSDDAIGEFEYGSGHVDPIQASDPGLVYDISQKDYVEMLCNFGYDSSMVKQMSGDNSSCPRSSHRDLVKNLNYPLMGVNVKPFTPFKVQFKRTVTNVGFANSTYKASIIPAYLRLNITVNPKVLSFKSLNEKRSFVVSITSKRGFKNQTACTSSLTWSDGTHKVRSPIVLMSFKELFSS	747

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral3822g00009	747	Pfam	Fibronectin type-III domain	638	737	IPR041469	-
	Pral3822g00009	747	CDD	Peptidases_S8_3	111	562	IPR034197	-
	Pral3822g00009	747	SUPERFAMILY	Subtilisin-like	133	590	IPR036852	GO:0004252\|GO:0006508
	Pral3822g00009	747	Pfam	Subtilase family	137	578	IPR000209	GO:0006508\|GO:0008236
	Pral3822g00009	747	Gene3D	-	607	741	-	-
	Pral3822g00009	747	Pfam	Peptidase inhibitor I9	33	113	IPR010259	-
	Pral3822g00009	747	ProSitePatterns	Serine proteases, subtilase family, serine active site.	527	537	IPR023828	-
	Pral3822g00009	747	Gene3D	Peptidase S8 propeptide/proteinase inhibitor I9	22	113	IPR037045	-
	Pral3822g00009	747	ProSiteProfiles	Serine proteases, subtilase domain profile.	118	590	-	-
	Pral3822g00009	747	Gene3D	-	330	466	-	-
	Pral3822g00009	747	Gene3D	Peptidase S8/S53 domain	138	603	IPR036852	GO:0004252\|GO:0006508
	Pral3822g00009	747	PANTHER	PROPROTEIN CONVERTASE SUBTILISIN/KEXIN	34	737	IPR045051	-
	Pral3822g00009	747	CDD	PA_subtilisin_like	337	459	-	-
	Pral3822g00009	747	PRINTS	Subtilisin serine protease family (S8) signature	136	155	IPR015500	-
	Pral3822g00009	747	PRINTS	Subtilisin serine protease family (S8) signature	198	211	IPR015500	-
	Pral3822g00009	747	PRINTS	Subtilisin serine protease family (S8) signature	526	542	IPR015500	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral3822g00009	Pral-Chr3822	38133	40823	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral3822g00009	38	742	Subtilisin-like Serine Gene Family	AT5G59190	53.597	0.0	728

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral3822g00009	-		-	pcin:129302788	911.753