Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3821g00004 ATGGCTTCTTCTTCTTCTTCTTTGGCTTCTCTGTTCTTTCACTCCCTTCTTCTCCTCCTCTGCCTCACTGCCTCTTCTTCTTCTTCTCCTCCTTCTGTTTCATCATCACTTCCTGCCTTGTCTCTCAAAAGGCAAGCTTCAATCTTGGTCTCTCTCAGACAAGGTTTTCAACCTCAAAATTCTACTCTTGAATCCTGGGATGTATCCAACTACGTGTCCCTTTGTTCTTGGGATGGCATCAAATGTGACCGTAGCAACAGGTCTGTGGTGTCCTTGGAGATATCCAATTACAACTTTTCTGGGTTTCTTTCCCCTGTCATCGCGAAGCTCCAGGGACTTGTGTCTATCTCGGTTGCAGATAATAGCTTTTCCGGCGAGCTTCCTTCGGAGATTCTCCGGCTGCCTTGGCTGCGGTTCCTCAACATATCCAACAACATGTTCACTGGAAATCTGACTTGGGAGTTCTCCGACATGAGTGGGCTTGAGGTCCTTGATGCCTATGACAACGACTTTAACGGCGAACTACCTCTTGGTGTCACCAATCTTCCCAAGCTCAGGCACTTAAATTTTGGCGGGAATTACTTTTCCGGGAGAATCCCAGAAGAGTATGGGAAAATGGTGGGCTTGAATTTTCTTTCTCTTGCTGGGAATGATCTAAGTGGGTCTATACCCCGTGAGCTTGGGAATCTCACTAATTTGACTCATTTGTACTTGGGATATTTCAACAAGTTTGACGGTGGAATCCCAAGTGAGTTTGGGAATCTAATCAATTTGGTTCATCTTGACCTTGCAAATTGTAGCTTGAATGCTACAATTCCTTCAGAATTAGGCAAGCTTTCAAAATTAGACACGCTTTTCTTGCAAACCAATCAGCTTACTGGTTCAATCCCACCTCAGATAGGCAATTTGAGCAATCTGAGATCTCTTGATCTTTCCAACAATGAGCTAATAGGAGAAATCCCATTTGAACTCTCAAACCTCCGTGAGCTCACACTTATCAACTTGTTCATCAACAAATTGCATGGTGAGATTCCTAAGTTCATCTCTGACCTCCCAAAGCTTGAAACTTTGCATCTGTGGAAAAACAACTTCACAGGTTCAATCCCTCCTGGGCTTGGCCAGAATGGGAAATTAATTGAGCTTGATCTTTCATCAAATAAGCTTACTGGGTTAGTCCCAAAATCTCTCTGCCTTGGGAAGAAGCTCAAGATCTTAATCTTGCTCAATAATTTTCTCTTTGGATCTTTGCCTGATGACCTTGGAGAATGCTATACACTCCAAAGAGTTCGCTTGGGTCAGAACTATTTAACAGGGAAAATACCAAACGGGTTTCTTTATCTGCCTGGACTTTTACTTCTTGAGCTGCAAAACAACTACCTCACTGGTGTTCTTCCCAAAGATTCAGCAAATTCAACATCAAAACTAGAGCAGTTGAATCTATCAAACAATCGTCTGTCCGGGTCTCTCCCAGAATCAATTGGGAATTTCCCAAATTTGCAGAATCTTCTCCTCAGTGAAAACAGATTCTCTGCGGAAATCCCACCAGATATGGGGAGGTTGAAGAGTCTGTTAAAGTTGGATATGAGCAGAAACAACATATCAGGCAGTATTCCTTCAGAGATAGGGAACTGTGCCTCGCTCACATACTTGGACTTGAGCCAGAACCAACTTTCAGGTCCTATCCCTGTTCAAATTTCCCAAATTCGCATCTTAAACTATCTTAATGTCTCAAGGAACAACCTTAACCAGAGCCTCCCAAAAGAACTAGGGACCATGAAAGGGCTAACTTCAGCAGATTTCTCTCACAACAACTTCTCCGGTTCAATTCCTGACGTTGGTCTGTTCACAGTCTTGAATTCATCCTTCTTTCAGGGAAACCCAAATCTATGTGGATATGATCTAAACCCATGTGGCACTCATTCATCAAACCCATTTTCAGACTCCCGTGAGACTAACAATACAAAATCTGGAGTTCCTGGGAAGTACAAGCTTCTTTTTGCACTTGCACTGCTGGGATGTTCTTTGATTTTTGCGACCTTAGCTATCATTAAAAGCAGAAAGAAGGCAAGGAGGAATTCAAATTCATGGAAGCTCACAGCATTTCAGAAGCTAGAGTATGGCAGTCAAGATATATTGGGATGCATAAAGGAGAGCAATGTGATAGGACAAGGAGGAGCTGGAATTGTGTACAGAGGCACCATGCCAAATGGAGAGGAGCTAGCAGTGAAAAAACTCTTAGGATTCAGCAAAGGCTCTTCTCATCATGACAATGGCTTATCTGCAGAAATAAGAACATTGGGCAGGATAAGGCACAGGTACATAGTGAGATTACTAGCTTTTGTCTCAAACAGAGAGACAAATTTGCTTGTGTATGAGTACATGCCAAATGGGAGTTTGGGTGAAGTGCTTCATGGGAAGAGAGGCGAGTTTTTGAAATGGGAAACGAGGCTTAAGATAGCCATTGAAGCAGCAAAAGGGCTTTGTTACCTGCACCATGATTGTTCACCATTGATAATACATAGAGATGTGAAGTCCAATAACATATTATTAAATTCTGAGTTCGAGGCTCATGTAGCTGACTTTGGACTTGCCAAGTTCTTACAAGACACTGGGGCTTCAGAATGCATGTCTTCCATTGCTGGCTCTTATGGCTATATTGCTCCAGAGTATGCATACACATTAAAAATTGACGAGAAGAGTGATGTTTATAGCTTCGGGGTGGTACTGCTAGAACTCTTGACTGGTAGACGGCCGGTGGGCGACTTCGGAGAAGAAGGAATAGATATTGTGCAGTGGACAAAGATGCAAACAAACTGGAACAAAGACAAGGTGGTGAGGATCCTTGATGAGAGGCTGCACAATAGTATCCCCATAGATGAAGCAAAACAAGTGTTCTTTGTGGCGATGCTTTGTGTTCAAGAACACAGTGTGGAGAGACCCACCATGAGAGAAGTGGTTGAAATGCTTGTACAAGCAAAGCAGCCCAATACGTTTTAA 2997 0.4304 MASSSSSLASLFFHSLLLLLCLTASSSSSPPSVSSSLPALSLKRQASILVSLRQGFQPQNSTLESWDVSNYVSLCSWDGIKCDRSNRSVVSLEISNYNFSGFLSPVIAKLQGLVSISVADNSFSGELPSEILRLPWLRFLNISNNMFTGNLTWEFSDMSGLEVLDAYDNDFNGELPLGVTNLPKLRHLNFGGNYFSGRIPEEYGKMVGLNFLSLAGNDLSGSIPRELGNLTNLTHLYLGYFNKFDGGIPSEFGNLINLVHLDLANCSLNATIPSELGKLSKLDTLFLQTNQLTGSIPPQIGNLSNLRSLDLSNNELIGEIPFELSNLRELTLINLFINKLHGEIPKFISDLPKLETLHLWKNNFTGSIPPGLGQNGKLIELDLSSNKLTGLVPKSLCLGKKLKILILLNNFLFGSLPDDLGECYTLQRVRLGQNYLTGKIPNGFLYLPGLLLLELQNNYLTGVLPKDSANSTSKLEQLNLSNNRLSGSLPESIGNFPNLQNLLLSENRFSAEIPPDMGRLKSLLKLDMSRNNISGSIPSEIGNCASLTYLDLSQNQLSGPIPVQISQIRILNYLNVSRNNLNQSLPKELGTMKGLTSADFSHNNFSGSIPDVGLFTVLNSSFFQGNPNLCGYDLNPCGTHSSNPFSDSRETNNTKSGVPGKYKLLFALALLGCSLIFATLAIIKSRKKARRNSNSWKLTAFQKLEYGSQDILGCIKESNVIGQGGAGIVYRGTMPNGEELAVKKLLGFSKGSSHHDNGLSAEIRTLGRIRHRYIVRLLAFVSNRETNLLVYEYMPNGSLGEVLHGKRGEFLKWETRLKIAIEAAKGLCYLHHDCSPLIIHRDVKSNNILLNSEFEAHVADFGLAKFLQDTGASECMSSIAGSYGYIAPEYAYTLKIDEKSDVYSFGVVLLELLTGRRPVGDFGEEGIDIVQWTKMQTNWNKDKVVRILDERLHNSIPIDEAKQVFFVAMLCVQEHSVERPTMREVVEMLVQAKQPNTF 998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3821g00004 998 SUPERFAMILY L domain-like 71 410 - -
Pral3821g00004 998 Gene3D Ribonuclease Inhibitor 348 645 IPR032675 -
Pral3821g00004 998 ProSiteProfiles Protein kinase domain profile. 715 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3821g00004 998 Gene3D Ribonuclease Inhibitor 245 347 IPR032675 -
Pral3821g00004 998 PRINTS Leucine-rich repeat signature 378 391 - -
Pral3821g00004 998 PRINTS Leucine-rich repeat signature 472 485 - -
Pral3821g00004 998 Gene3D Ribonuclease Inhibitor 44 153 IPR032675 -
Pral3821g00004 998 SUPERFAMILY Protein kinase-like (PK-like) 710 990 IPR011009 -
Pral3821g00004 998 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 684 793 - -
Pral3821g00004 998 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 243 348 - -
Pral3821g00004 998 Pfam Protein tyrosine and serine/threonine kinase 717 989 IPR001245 GO:0004672|GO:0006468
Pral3821g00004 998 SMART LRR_typ_2 447 470 IPR003591 -
Pral3821g00004 998 SMART LRR_typ_2 255 279 IPR003591 -
Pral3821g00004 998 SMART LRR_typ_2 303 327 IPR003591 -
Pral3821g00004 998 SMART LRR_typ_2 206 230 IPR003591 -
Pral3821g00004 998 SMART LRR_typ_2 568 592 IPR003591 -
Pral3821g00004 998 SMART LRR_typ_2 472 496 IPR003591 -
Pral3821g00004 998 SMART LRR_typ_2 520 544 IPR003591 -
Pral3821g00004 998 SMART LRR_typ_2 351 375 IPR003591 -
Pral3821g00004 998 SMART LRR_typ_2 376 398 IPR003591 -
Pral3821g00004 998 Gene3D Ribonuclease Inhibitor 154 244 IPR032675 -
Pral3821g00004 998 Gene3D Transferase(Phosphotransferase) domain 1 794 997 - -
Pral3821g00004 998 Pfam Leucine rich repeat N-terminal domain 43 83 IPR013210 -
Pral3821g00004 998 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 241 991 - -
Pral3821g00004 998 FunFam Leucine-rich repeat receptor-like protein kinase 42 201 - -
Pral3821g00004 998 ProSitePatterns Serine/Threonine protein kinases active-site signature. 838 850 IPR008271 GO:0004672|GO:0006468
Pral3821g00004 998 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 355 641 - -
Pral3821g00004 998 ProSiteProfiles Leucine-rich repeat profile. 474 496 IPR001611 GO:0005515
Pral3821g00004 998 SMART serkin_6 715 989 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3821g00004 998 Pfam Leucine Rich Repeat 305 327 IPR001611 GO:0005515
Pral3821g00004 998 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 794 998 - -
Pral3821g00004 998 Gene3D Phosphorylase Kinase; domain 1 683 793 - -
Pral3821g00004 998 ProSiteProfiles Leucine-rich repeat profile. 377 398 IPR001611 GO:0005515
Pral3821g00004 998 ProSiteProfiles Leucine-rich repeat profile. 305 328 IPR001611 GO:0005515
Pral3821g00004 998 Pfam Leucine rich repeat 352 410 IPR001611 GO:0005515
Pral3821g00004 998 Pfam Leucine rich repeat 453 509 IPR001611 GO:0005515
Pral3821g00004 998 Pfam Leucine rich repeat 518 557 IPR001611 GO:0005515
Pral3821g00004 998 SUPERFAMILY L domain-like 320 639 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3821g00004 Pral-Chr3821 40583 45303 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3821g00004 32 991 Receptor kinase-like Gene Family AT5G65700 57.380 0.0 1084
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral3821g00004 PK_Tyr_Ser-Thr 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3821g00004 - - gmx:100816158 1444.1