Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3819g00009 ATGCCGTCCTCAGTTTTGTCAAGTGACAGCATGCATATAGGTCTTCTTGCTGCTGCAGCTCACGCGGCTGCAACGAATAGCCGCTTTACTATATTCTATAACCCAAGGGCAAGCCCATCAGAATTTGTCATTCCCTTAGCCAAGTATGTCAAAGCTGTATATCATACCCGAGTTTCTGTTGGCATGCGATTTAGGATGTTATTCGAGACAGAAGAATCAAGTGTCCGTAGGTACATGGGTACTATAACAGGCATTAGTGATTTAGATCCTGTTCGCTGGCCAAATTCACACTGGCGTTCAGTGAAGGTTGGCTGGGATGAGTCCACTGCAGGGGACAGGCAGCCTAGAGTTTCCTTGTGGGAGATTGAACCGTTGACAACATTCCCTATGTATCCATCCCCATTTCCTTTGAGGCTGAAACGCCCTTGGCCGTCAGGACTACCTTCTTTTGGTCTAAAAGATGGTGACATGAACATTGGTTCTCCATACACGTGGCTCCAAGGTGGGCTTGGGGATCAAGGAATGCAATCTCTGAACTTCCAGGGACTGGGGGTTGCACCATGGATGCAGCCAACACTTGGTGCTTCCATGTCCGGACTTCAGCCAGAAATATACCAAGCAATGGCTGCTGCTGCACTTCAGGAAATGAGAGCAATGGGTCCGTCTAAACCTTCTTCTGAATCTCTGCTGCAGTTTCAGCAGTCTTCAAATGTTCCTGGTGCTCCTTCTTCTGGTATCCAGAGGCAAGTGTTACAGCAGTCTCAGTCCCAAAATGTCCTATACAACTTTCAAGAAAACCAGATTCCTTCTCAGTCTTCACTTCTGCAACGACAGATGCAGCGTTACCATCCTTATAATGATCAGAGGCGGCAGCAGCAGCAGCAGCATCGACCTAACAGTTTACCTGTTCAGCAGCAGATCTCAAATGTTGTTTCTCCTTTGTCTAATTTTGCATCACCCACCCAGTTTGTCTCTCCACCCATGCCAGCCATTGCTTCAAATTGCCAGCAGCAGAGTTTCCCTGAACCTGCCAGGAACCAGAACCAAATTCCCAGCTCTGATGTTTCTGCTATCCACAGTCTACTTGGATCGCTTCCCCAGGATGGAGTATCCCAGTTACTTAACATGAATGGATCCAACTCTCTGGTTTCTCCTGCTTCCTTACTACCCAAGCAAATAACTGCTGAACCTCAGTTTCATACTGCTGCTGCTCAGTGTGTATTACCCCAGGTGGGAAACTTGGGTACATCACACTCAAATGTATCTGAACTTCCTATTTTGCCTCCATTTCCTGGAAGAGAATATTCTGCATACCCAGCTTCAAACTTCGGTGGTGCTACAGGGACTGATTATCCTCCAAGTTCAGATATGACAACATCAAGTTGTGTAGATGAATCTGGTTTTTTGCAGTCTTCAGAAAATGTGGAGCAAGCAAATACATCAACTGGAACCTTTGTCAAGGTTCACAAGTTAGGGTGCTTTGGGAGGTCACTGGACATCTCTAAGTTTAGCAGCTACGATGAACTACGTAGTGAGCTTGCCCGCATGTTTGGGCTTGAAGGCCAACTAGAGAACCCTCAGAGATCAGGCTGGCAGCTTGTATTCGTTGACCGGGAGAATGATGTTCTTCTCCTTGGTGATGACCCTTGGCAGGAGTTTGTGAACAATGTGTGGTACATCAAGATTCTGTCTCCACTTGAAGTACAACAAATGGGCAGAGAAAGTTCTGGTCCCACGGCTTCTGCATTAGCCCACAGGCTTTCTACCACTGACAACTATGCGAGTCGGCAAGAGTTGAGAAATCCTAGCAATGGGATTGCGTCAATGGGGTCTCTAGACTATTAG 1845 0.4705 MPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPSGLPSFGLKDGDMNIGSPYTWLQGGLGDQGMQSLNFQGLGVAPWMQPTLGASMSGLQPEIYQAMAAAALQEMRAMGPSKPSSESLLQFQQSSNVPGAPSSGIQRQVLQQSQSQNVLYNFQENQIPSQSSLLQRQMQRYHPYNDQRRQQQQQHRPNSLPVQQQISNVVSPLSNFASPTQFVSPPMPAIASNCQQQSFPEPARNQNQIPSSDVSAIHSLLGSLPQDGVSQLLNMNGSNSLVSPASLLPKQITAEPQFHTAAAQCVLPQVGNLGTSHSNVSELPILPPFPGREYSAYPASNFGGATGTDYPPSSDMTTSSCVDESGFLQSSENVEQANTSTGTFVKVHKLGCFGRSLDISKFSSYDELRSELARMFGLEGQLENPQRSGWQLVFVDRENDVLLLGDDPWQEFVNNVWYIKILSPLEVQQMGRESSGPTASALAHRLSTTDNYASRQELRNPSNGIASMGSLDY 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3819g00009 614 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 572 IPR044835 GO:0003677|GO:0006355|GO:0009725
Pral3819g00009 614 MobiDBLite consensus disorder prediction 218 249 - -
Pral3819g00009 614 MobiDBLite consensus disorder prediction 331 350 - -
Pral3819g00009 614 ProSiteProfiles PB1 domain profile. 483 567 IPR000270 GO:0005515
Pral3819g00009 614 MobiDBLite consensus disorder prediction 224 249 - -
Pral3819g00009 614 SUPERFAMILY CAD & PB1 domains 474 557 - -
Pral3819g00009 614 FunFam Auxin response factor 478 572 - -
Pral3819g00009 614 Pfam AUX/IAA family 472 565 IPR033389 -
Pral3819g00009 614 Gene3D - 479 572 - -
Pral3819g00009 614 Pfam Auxin response factor 19 102 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Pral3819g00009 614 Gene3D - 57 129 - -
Pral3819g00009 614 MobiDBLite consensus disorder prediction 593 614 - -
Pral3819g00009 614 FunFam Auxin response factor 57 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3819g00009 Pral-Chr3819 87737 92576 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3819g00009 1 258 B3 DNA Binding Superfamily AT5G37020 65.769 4.84e-92 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3819g00009 - - pcin:129302482 1074.31