Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3816g00002 ATGGCTCAAGATACTTCCGGCACCGATTCAAATTACAAGCGCCAAGGTCTCTTGAAAGATCAAGTGCGTTTGGTCAAGAGGAAAGACAGTGATCGCTATGAGATTGTCCCAATCCATGATCTTCTGTCCTTTGACAAGGGTTTCTTTATAGTAATCCGTGCTTGCCAACTGTTAGCCCAGAAAAATGATGGAATGATATTGGTAGGATTGGCTGGCCCTTCTGGGGCTGGTAAAACTATATTTACAGAAAAAATACTCAATTTCATGCCTGGCATTGCAGTCATTTCAATGGACAATTACAATGATTCCAGTCGAATTGTTGATGGGAACTTTGATGATCCACGCTTAACAGACTATGATACATTGCTCCAGAATGTCCATGATTTGAAGGCAGGAAAATCAGTTGAGGTTCCAATCTATGATTTTAAGTCCAGTTCACGCACAGGATACAGAACAGTTGAAGTCCCCAGCTCCCGCATTGTGATCATAGAGGGCATCTATGCATTAAGTGAGAAGTTGCGACCCCTACTGGACCTTCGAGTATCTGTCACTGGTGGAGTTCACTTGGACCTTGTCAAACGAGTTATTCGGGACATACAACGTGCTGGCCAAGAACCTGAAGAAATTATTCATCAAATATCTGAGACGGTATACCCAATGTACAAGGCCTTTATTGAACCAGATCTTCAGACAGCGCACATCAAAATTGTCAACAAATTCAATCCATTTACTGGTTTTCAAAGTCCTACCTACATACTAAAGTCGGCAAGGAAAGTAACAGTTGATGAAATTAAAGCTGTTCTCTCTGAAGATTATAAGGAAACAACAGAGCAGACTTATGACATATATCTTCTGCCTCCTGGTGAAGATCCAGAAACTTGCCAATCATACCTACGGATGCGGAACAAAGATGGGAAATACTGTCTGATGTTTGAGGAATGGGTGACAGATAATCCTTTTGTTATATCCCCAAGAATTACTTTTGAGGTAAGTGTGCGCCTTCTTGGTGGGCTGATGGCCTTGGGGTACACGATTGCTGCCATCCTTAAAAGAGATAGCCATGTGTACTCTGACGATAGGATCTGTGTGAAACTTGATTGGCTTGAGCAACTGAATCGACATTATGTTCAGGTGCATGGAAGAGATCGCATGGTTGTAAAATATGCAGCAGAGCAGCTGGGTCTGGATGGTTCTTACATTCCTCGTACCTACATTGAGCAAATTCAACTTGAAAAGCTTGTAAATGAAGTTATGGCCTTGCCAGATGATTTGAAGACAAAGCTTAGCCTAGATGAGGATTTGGTGTCAAGCCCCAAAGAAGCCCTTTCTCGAGCCTCTGCAGACAGGGTTGCCATGAGAAGTAAGCATATCAGAAGCCTGTCACAATCATATACAAATCAAAGGGACAAGAACCTAGCGAAACTTGCACTATATGTTTCCAAGAATCGCGGGTTTAGTGAAAGAAATCTGGATTTGCCAACAACACCATCAAATCAGCTAAACATCACTCAGCTTTCCGAGCAAATCTCCTCTCTTAATGATAGAATGGACGAGTTTACAAATCGCATTGAGGAGCTGAACTCAAAGTTAGCTATCAAGAAAAATTCTCTCAGCCAGCAAAATATGTCCCTCCAAGCCGAAGCTTGCAGTGGTTCTGCTCCTACCTCTTACTTCCTTACTAGTCTGGGCAGTGGCTCTTTAACTGGATCCATTATGCCAAATTCCTCATCTTCATTGCAGTTAGCCAAAGAGTCACCTTTAATTGAAGAGGTATCTTAA 1779 0.4227 MAQDTSGTDSNYKRQGLLKDQVRLVKRKDSDRYEIVPIHDLLSFDKGFFIVIRACQLLAQKNDGMILVGLAGPSGAGKTIFTEKILNFMPGIAVISMDNYNDSSRIVDGNFDDPRLTDYDTLLQNVHDLKAGKSVEVPIYDFKSSSRTGYRTVEVPSSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIVNKFNPFTGFQSPTYILKSARKVTVDEIKAVLSEDYKETTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYCLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIAAILKRDSHVYSDDRICVKLDWLEQLNRHYVQVHGRDRMVVKYAAEQLGLDGSYIPRTYIEQIQLEKLVNEVMALPDDLKTKLSLDEDLVSSPKEALSRASADRVAMRSKHIRSLSQSYTNQRDKNLAKLALYVSKNRGFSERNLDLPTTPSNQLNITQLSEQISSLNDRMDEFTNRIEELNSKLAIKKNSLSQQNMSLQAEACSGSAPTSYFLTSLGSGSLTGSIMPNSSSSLQLAKESPLIEEVS 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3816g00002 592 Coils Coil 502 547 - -
Pral3816g00002 592 ProSiteProfiles CYTH domain profile. 252 410 IPR023577 -
Pral3816g00002 592 PANTHER URIDINE KINASE 32 423 - -
Pral3816g00002 592 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
Pral3816g00002 592 Pfam CYTH domain 267 404 IPR023577 -
Pral3816g00002 592 Coils Coil 588 592 - -
Pral3816g00002 592 Gene3D - 260 413 - -
Pral3816g00002 592 PRINTS Uridine kinase signature 132 147 - -
Pral3816g00002 592 PRINTS Uridine kinase signature 65 82 - -
Pral3816g00002 592 PRINTS Uridine kinase signature 188 198 - -
Pral3816g00002 592 PRINTS Uridine kinase signature 224 237 - -
Pral3816g00002 592 CDD UMPK_like 67 239 - -
Pral3816g00002 592 SUPERFAMILY CYTH-like phosphatases 262 407 IPR033469 -
Pral3816g00002 592 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 62 236 IPR027417 -
Pral3816g00002 592 Gene3D - 65 259 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3816g00002 Pral-Chr3816 17626 24280 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3816g00002 53 236 PRT Gene Family AT1G55810 27.835 1.07e-16 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3816g00002 K00876 - qsa:O6P43_032837 999.579