LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral3816g00001	ATGGAAAGAAGAGATCTTTCTTTCTCTATTTTAGCTTTCTTTATCTTCTTCTTCTTCTTCTTCTGCACTTCAGTATCTGGTTTGCTTTCTTCTAAAGGTGTCAACAATGAAGTGCAAGCTCTTATTGGCATTAAAAGTTCTTTGAAGGATCCTAACAATGCCCTTCATAACTGGGATATGTATGAAGTGGAGCCTTGTAACTGGGCTTTGGTATCTTGCTTTGGTGGTTCTGTGACTGACCTGGAATTTCCAAGCCAAAACTTTTCTGGCTTTCTTTCCCCAAGCATTAGCAACTTAACCAATCTCAGGAATCTGATCCTGCAAGCTAATAATATATCAGGACCAATTCCTTCTGAGATTTGGAAGCTGCAAAAGCTTCAAACTCTTGATCTTTCTCATAATTCCTTCACTGGTCAACTTCCAGAGAGTCTCTGCCGCATGAAGAGTCTCAATTATCTGAGGCTGAACAATAATAGTCTTACAGGACCAATACCTTCCTCTTTGGCTGACATGACCCAGCTTGCTATTCTGGATGTTTCCTATAATAACTTGAGTGGACCTCTACCAACAATAAATGCAAAAACTTTCAATATTCTAGGAAATCCCCAGATTTGTGCCACTGGAACTGACCAACAGTGCTTCAGAACAACAGTTTCAACTAATTTTAATAACTCTCAAGGTTCGCCACCCACCAGTAAACCAAAGAATCGCAAACTTGTCTTGGCACTTGCTTTAGCGGTAAGCTGCGTCTCCTTACTAACTCTGGTCTTCGGCTTCCTCTGGTGGAGACAAAGATCAAGCAAACAAGTTTTCTTCGACATTAATGAACAAATGCAAGAAGATGTGCGCCTTGGAAACTTGAGAAAGTTCCACATAAGAGAACTTGAAGTTGCCACGAACAAGTTCAGCAGCAAGAACTTGATTGGCAAAGGAGGATATGGGAATGTGTACAAAGGCTATCTTTCAAATGGTGGGGTCATAGCAGTGAAAAGGCTTAGAGATGGCAGTGCCATTACAGGGGAGATCCAGTTCCAGACTGAAGTGGAGATGATCAGCCTGGCTGTGCATCGCAATTTGCTTCGTCTCTATGGATACTGCATCACTCCTACAGAGAGACTCCTGGTTTATCCCTTCATGTCCAATGGTAGTGTTGCTTCTCGTCTCAAAGCGAAGCCTGCTTTAGAGTGGAGCACAAGGAAGAGGATAGCTTTGGGAGCAGCAAGAGGGTTAGTATACCTACATGAGCAATGTGATCCCAAGATTATTCATAGGGATGTGAAGGCTGCAAATATATTGCTTGATGAGTACTGTGAAGCAGTGGTTGGGGATTTTGGGTTAGCTAAACTGTTAGATCACAGGGAATCACATGTCACCACAGCTGTTAGAGGCACTGTAGGCCATATAGCACCAGAGTACCTCTCAACAGGCCAATCTTCTGATAAAACTGATGTCTTTGGCTTTGGGATCCTTCTCCTTGAACTCATCTCTGGCCGCACAGCTCTTGAATTTGGAAAAGCAGCTAACCAGAAAGGAGCCATGCTTGATTGGGTGAAGAAAATGCATCAAGAGAAGAAACTTGACTTGTTGATTGACAAGGACCTTAGAAACAACTATGACAGAATTGAGCTTGAAGAAATGGTTCGAATAGCACTCTTGTGTACCCAGTACGTTCCCGCTCATAGACCCAAAATGTCTGAAGTGGTTAGAATGCTTGAAGGAGATGGTCTTGCAGAGAAATGGGAAGCTTCAAAGGGTGATGAATCAACAAGGGGCAGAGCAAGTGAGCTTTCTTCTTCAGAACGCTACTCTGATCTCACTGATGACTCTACACTGCTTAATCAGGCCATGGAGCTTTCTGGTCCAAGGTGA	1869	0.4302	MERRDLSFSILAFFIFFFFFFCTSVSGLLSSKGVNNEVQALIGIKSSLKDPNNALHNWDMYEVEPCNWALVSCFGGSVTDLEFPSQNFSGFLSPSISNLTNLRNLILQANNISGPIPSEIWKLQKLQTLDLSHNSFTGQLPESLCRMKSLNYLRLNNNSLTGPIPSSLADMTQLAILDVSYNNLSGPLPTINAKTFNILGNPQICATGTDQQCFRTTVSTNFNNSQGSPPTSKPKNRKLVLALALAVSCVSLLTLVFGFLWWRQRSSKQVFFDINEQMQEDVRLGNLRKFHIRELEVATNKFSSKNLIGKGGYGNVYKGYLSNGGVIAVKRLRDGSAITGEIQFQTEVEMISLAVHRNLLRLYGYCITPTERLLVYPFMSNGSVASRLKAKPALEWSTRKRIALGAARGLVYLHEQCDPKIIHRDVKAANILLDEYCEAVVGDFGLAKLLDHRESHVTTAVRGTVGHIAPEYLSTGQSSDKTDVFGFGILLLELISGRTALEFGKAANQKGAMLDWVKKMHQEKKLDLLIDKDLRNNYDRIELEEMVRIALLCTQYVPAHRPKMSEVVRMLEGDGLAEKWEASKGDESTRGRASELSSSERYSDLTDDSTLLNQAMELSGPR	622

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral3816g00001	622	MobiDBLite	consensus disorder prediction	579	622	-	-
	Pral3816g00001	622	SUPERFAMILY	Protein kinase-like (PK-like)	287	573	IPR011009	-
	Pral3816g00001	622	MobiDBLite	consensus disorder prediction	579	594	-	-
	Pral3816g00001	622	FunFam	Somatic embryogenesis receptor kinase 1	271	378	-	-
	Pral3816g00001	622	Pfam	Protein kinase domain	303	569	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3816g00001	622	MobiDBLite	consensus disorder prediction	595	616	-	-
	Pral3816g00001	622	Gene3D	Transferase(Phosphotransferase) domain 1	379	591	-	-
	Pral3816g00001	622	ProSitePatterns	Protein kinases ATP-binding region signature.	308	330	IPR017441	GO:0005524
	Pral3816g00001	622	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	421	433	IPR008271	GO:0004672\|GO:0006468
	Pral3816g00001	622	Pfam	Leucine rich repeat N-terminal domain	35	73	IPR013210	-
	Pral3816g00001	622	FunFam	Somatic embryogenesis receptor-like kinase 1	379	591	-	-
	Pral3816g00001	622	SMART	serkin_6	302	571	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3816g00001	622	FunFam	Leucine-rich repeat receptor-like protein kinase	34	190	-	-
	Pral3816g00001	622	Gene3D	Phosphorylase Kinase; domain 1	271	378	-	-
	Pral3816g00001	622	ProSiteProfiles	Protein kinase domain profile.	302	552	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral3816g00001	622	SUPERFAMILY	L domain-like	35	198	-	-
	Pral3816g00001	622	Gene3D	Ribonuclease Inhibitor	33	215	IPR032675	-
	Pral3816g00001	622	PANTHER	SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1	13	582	-	-
	Pral3816g00001	622	Pfam	Leucine rich repeat	125	184	IPR001611	GO:0005515

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral3816g00001	Pral-Chr3816	7805	12339	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral3816g00001	12	622	Receptor kinase-like Gene Family	AT5G16000	68.160	0.0	853

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-II	Pral3816g00001		Pkinase	5.3e-43	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral3816g00001	-		-	gmx:100790194	918.302