Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3815g00005 ATGAAACCATCAAATAACGTATGGATTCGACGCCAACAATGTCCATGTGGAGATTGGAAGTGTTTTATGAAGTATGATGGAGATGATCAGATGTCAGTAAGATCTCAGGCCACAAAGACTGATACAGTGCCTTCATCGTCATCATCAGAAGCTGTCTTCACTCCTTATGTAGGTCAAATTTTCAAAAGCGATGATGATGCATTTGAATACTATAGCAATTTTGCCCGGAAGAATGGATTTTCAATCAGAAAAGCTCGCTCAACAGAAAGCCAACATTTAGGAATATATAGAAGGGATTTTGTTTGTTACAGATCTGGCTTCAATCAACCAAGAAAAAAGGCCAATGTGGAGCATCACAGAGAGCGAAAATCTGTACGATGTGGATGTGATGCAAAATTATACTTGACTAAGGAAATTGTTGATGGTGTTGCTCAATGGTATGTGTCCCAATTTAGTAATGTTCATAACCATGAGTTGTTGGAAGATGACCAAGTACGACTTCTACCAGCATATCGTAAAATACAAGAGGCTGATCAGGAACGCATTCTTCTACTATCCAAAGCTGGATTCCCTGTGAACCGTATTGTGAAGGTGTTAGAGCTTGAAAAAGGAGTTCAGCCTGGACAACTGCCTTTCATAGAAAAGGATGTTAGGAATTTTGTTCGGACTTGCAAGAAAGCAGTTCAAGAAAATGATGCTTTCCTGAATGAAAAAAGAGAGAATGATGTGCATGAACTTGTGGAGACCTGTAAGGCAATGACAGATAAAGATCCCGATTTTATATTTGATTATACTGCCGATGAAAATGGTAAAGTGGAAAATATAGCTTGGTCATATGGTGAATCTATTCGGGCATATTCTGTTTTTGGTGATGTAGTTACCCTGGACACTACATACCGTTCTGTTACGTATGGATTACTCCTTGGGGTGTGGTTTGGCATTGATAATAATGGAAATGCGATAATATTTGGGCTTGTGTTGTTACAAGACGAAAGTTCTTATTCATTTGCATGGGCTTTACGGACATTTGTACGATTTATGAGAGGGAGACATCCACAAACAATTATAACTGACATAGATCCAACTCTGGGTGACGCTATTTCTAAGGAGTTGTCTGAAACTAAACATGTCATATGCACTTGGCATATTCTATCAAAACTATCAAATTGGTTCTCCGTACCGCTGGGAGTACAGTATGCAGATTTTAGGTTAGAGTTCAATATATTATGTCACCTAGAGAGCATAGAAAATTTTGAACATCAGTGGGATCTTTTTGTAGCTCGATTTGGACTTGTTTCTGACAAGCATATAGCTTTGTTATTCTCACTTCGAGCATCTTGGCCACTCTGCTACGTTAAGAGTTATTTCGTTGCTCGTTCATTGACTGCTGAGTTTTCACAATCTTTGGATTCAACCATGAAAAGAATTTTAGATTCACAAACATGTCTACAAGGATTTTTTGAGCAGGTAGGTATTGTTGCTACCTCATCAATGTTGGCAAGAGAAGGGATGCAGTACATGTGCGTAAAGACATGCATCCCTATTGAAGAACATGCAAGGAGTACTCTTACACCTTACGCTTTCAATGTGTTCCAAAATGAAATTGTGCTGTCAACACAATATGCCACTACAGAACTGACCAATGGATCCTACCTTGTTCAGCACTACAAGAAAATGGATGAAGAGCGCCTTGTGATTTGGGCACAAGCTGACGAACAAATTCAATGTTCCTGCAAGGAATTTGAACATTCTGGAATACTGTGCCGGCATTCGATTCGTGTACTTGCAGTGAAGAACTACTTCCAATTACCTATGAAATATTTTCTCCCTCGGTGGCGACGAGAAAGTTATTTGGCTCCTTTTGATGAACAAAATCTTCAGAACAGTGATGAGTGTGCTGAAGCCTTTCATTCTTTGGCTGCCACTCTGCTGACAGAATCATTAATCTCCAAGGAACGGTTTAATTATGTTCATAGAGAACTCACTGGGATTCTTGAACGTGTTAAGAATATGGAAGCTGTGGACGAACTTGCTGTCAATGTGGCAGCTAATAATGTTAGTGAACCCTAG 2070 0.3937 MKPSNNVWIRRQQCPCGDWKCFMKYDGDDQMSVRSQATKTDTVPSSSSSEAVFTPYVGQIFKSDDDAFEYYSNFARKNGFSIRKARSTESQHLGIYRRDFVCYRSGFNQPRKKANVEHHRERKSVRCGCDAKLYLTKEIVDGVAQWYVSQFSNVHNHELLEDDQVRLLPAYRKIQEADQERILLLSKAGFPVNRIVKVLELEKGVQPGQLPFIEKDVRNFVRTCKKAVQENDAFLNEKRENDVHELVETCKAMTDKDPDFIFDYTADENGKVENIAWSYGESIRAYSVFGDVVTLDTTYRSVTYGLLLGVWFGIDNNGNAIIFGLVLLQDESSYSFAWALRTFVRFMRGRHPQTIITDIDPTLGDAISKELSETKHVICTWHILSKLSNWFSVPLGVQYADFRLEFNILCHLESIENFEHQWDLFVARFGLVSDKHIALLFSLRASWPLCYVKSYFVARSLTAEFSQSLDSTMKRILDSQTCLQGFFEQVGIVATSSMLAREGMQYMCVKTCIPIEEHARSTLTPYAFNVFQNEIVLSTQYATTELTNGSYLVQHYKKMDEERLVIWAQADEQIQCSCKEFEHSGILCRHSIRVLAVKNYFQLPMKYFLPRWRRESYLAPFDEQNLQNSDECAEAFHSLAATLLTESLISKERFNYVHRELTGILERVKNMEAVDELAVNVAANNVSEP 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3815g00005 689 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 44 669 IPR031052 GO:0006355
Pral3815g00005 689 ProSiteProfiles Zinc finger SWIM-type profile. 551 599 IPR007527 GO:0008270
Pral3815g00005 689 Pfam FAR1 DNA-binding domain 69 160 IPR004330 -
Pral3815g00005 689 Pfam MULE transposase domain 292 385 IPR018289 -
Pral3815g00005 689 SMART 26again6 574 601 IPR006564 GO:0008270
Pral3815g00005 689 Pfam SWIM zinc finger 571 598 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3815g00005 Pral-Chr3815 37392 40557 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pral3815g00005 MULE 7.3e-20 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3815g00005 - - qsa:O6P43_014468 1165.21