Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3815g00003 ATGGAAGCGTGCTTTGAGTGCAGAAGGGAGAGATATGCTGAAAAAATAAGAATGAAACCATCAAATAACGTATGGATTCGACGCCAACAATGTCCATGTGGAGATTGGAAGTGTTTTATGAAGTATGATGGAGATGATCAGATGTCAGTAAGATCTCAGGCCACAAAGACTGATACAGTGCCTTCATCGTCATCATCAGAAGCTGTCTTCACTCCTTATGTAGGTCAAATTTTCAAAAGCGATGATGATGCATTTGAATACTATAGCAATTTTGCCCGGAAGAATGGATTTTCAATCAGAAAAGCTCGCTCAACAGAAAGCCAACATTTAGGAATATATAGAAGGGATTTTGTTTGTTACAGATCTGGCTTCAATCAACCAAGAAAAAAGGCCAATGTGGAGCATCACAGAGAGCGAAAATCTGTACGATGTGGATGTGATGCAAAATTATACTTGACTAAGGAAATTGTTGATGGTGTTGCTCAATGGTATGTGTCCCAATTTAGTAATGTTCATAACCATGAGTTGTTGGAAGATGACCAAGTACGACTTCTACCAGCATATCGTAAAATACAAGAGGCTGATCAGGAACGCATTCTTCTACTATCCAAAGCTGGATTCCCTGTGAACCGTATTGTGAAGGTGTTAGAGCTTGAAAAAGGAGTTCAGCCTGGACAACTGCCTTTCATAGAAAAGGATGTTAGGAATTTTGTTCGGACTTGCAAGAAAGCAGTTCAAGAAAATGATGCTTTCCTGAATGAAAAAAGAGAGAATGATGTGCATGAACTTGTGGAGACCTGTAAGGCAATGACAGATAAAGATCCCGATTTTATATTTGATTATACTGCCGATGAAAATGGTAAAGTGGAAAATATAGCTTGGTCATATGGTGAATCTATTCGGGCATATTCTGTTTTTGGTGATGTAGTTACCCTGGACACTACATACCGTTCTGTTACGTATGGATTACTCCTTGGGGTGTGGTTTGGCATTGATAATAATGGAAATGCGATAATATTTGGGCTTGTGTTGTTACAAGACGAAAGTTCTTATTCATTTGCATGGGCTTTACGGACATTTGTACGATTTATGAGAGGGAGACATCCACAAACAATTATAACTGACATAGATCCAACTCTGGGTGACGCTATTTCTAAGGAGTTGTCTGAAACTAAACATGTCATATGCACTTGGCATATTCTATCAAAACTATCAAATTGGTTCTCCGTACCGCTGGGAGTACAGTATGCAGATTTTAGGTTAGAGTTCAATATATTATGTCACCTAGAGAGCATAGAAAATTTTGAACATCAGTGGGATCTTTTTGTAGCTCGATTTGGACTTGTTTCTGACAAGCATATAGCTTTGTTATTCTCACTTCGAGCATCTTGGCCACTCTGCTACGTTAAGAGTTATTTCGTTGCTCGTTCATTGACTGCTGAGTTTTCACAATCTTTGGATTCAACCATGAAAAGAATTTTAGATTCACAAACATGTCTACAAGGATTTTTTGAGCAGGTAGGTATTGTTGCTACCTCATCAATGTTGGCAAGAGAAGGGATGCAGTACATGTGCGTAAAGACATGCATCCCTATTGAAGAACATGCAAGGAGTACTCTTACACCTTACGCTTTCAATGTGTTCCAAAATGAAATTGTGCTGTCAACACAATATGCCACTACAGAACTGACCAATGGATCCTACCTTGTTCAGCACTACAAGAAAATGGATGAAGAGCGCCTTGTGATTTGGGCACAAGCTGACGAACAAATTCAATGTTCCTGCAAGGAATTTGAACATTCTGGAATACTGTGCCGGCATTCGATTCGTGTACTTGCAGTGAAGAACTACTTCCAATTACCTATGAAATATTTTCTCCCTCGGTGGCGACGAGAAAGTTATTTGGCTCCTTTTGATGAACAAAATCTTCAGAACAGTGATGAGTGTGCTGAAGCCTTTCATTCTTTGGCTGCCACTCTGCTGACAGAATCATTAATCTCCAAGGAACGGTTTAATTATGTTCATAGAGAACTCACTGGGATTCTTGAACGTGTTAAGAATATGGAAGCTGTGGACGAACTTGCTGTCAATGTGGCAGCTAATAATGTTAGTGAACCCTAG 2121 0.3942 MEACFECRRERYAEKIRMKPSNNVWIRRQQCPCGDWKCFMKYDGDDQMSVRSQATKTDTVPSSSSSEAVFTPYVGQIFKSDDDAFEYYSNFARKNGFSIRKARSTESQHLGIYRRDFVCYRSGFNQPRKKANVEHHRERKSVRCGCDAKLYLTKEIVDGVAQWYVSQFSNVHNHELLEDDQVRLLPAYRKIQEADQERILLLSKAGFPVNRIVKVLELEKGVQPGQLPFIEKDVRNFVRTCKKAVQENDAFLNEKRENDVHELVETCKAMTDKDPDFIFDYTADENGKVENIAWSYGESIRAYSVFGDVVTLDTTYRSVTYGLLLGVWFGIDNNGNAIIFGLVLLQDESSYSFAWALRTFVRFMRGRHPQTIITDIDPTLGDAISKELSETKHVICTWHILSKLSNWFSVPLGVQYADFRLEFNILCHLESIENFEHQWDLFVARFGLVSDKHIALLFSLRASWPLCYVKSYFVARSLTAEFSQSLDSTMKRILDSQTCLQGFFEQVGIVATSSMLAREGMQYMCVKTCIPIEEHARSTLTPYAFNVFQNEIVLSTQYATTELTNGSYLVQHYKKMDEERLVIWAQADEQIQCSCKEFEHSGILCRHSIRVLAVKNYFQLPMKYFLPRWRRESYLAPFDEQNLQNSDECAEAFHSLAATLLTESLISKERFNYVHRELTGILERVKNMEAVDELAVNVAANNVSEP 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3815g00003 706 Pfam FAR1 DNA-binding domain 86 177 IPR004330 -
Pral3815g00003 706 SMART 26again6 591 618 IPR006564 GO:0008270
Pral3815g00003 706 Pfam MULE transposase domain 309 402 IPR018289 -
Pral3815g00003 706 Pfam SWIM zinc finger 588 615 IPR007527 GO:0008270
Pral3815g00003 706 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 61 686 IPR031052 GO:0006355
Pral3815g00003 706 ProSiteProfiles Zinc finger SWIM-type profile. 568 616 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3815g00003 Pral-Chr3815 37392 41743 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pral3815g00003 MULE 7.5e-20 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3815g00003 - - qsa:O6P43_014468 1165.21