Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3813g00007 ATGTCTTCCTCATCATCTTCTTCTTCATCTTCATCTTCCCCTCACGATAGTCCCAATCATAACCATAATGCTGGTGCTGATCCTGGCCCTAGCTCAAGAACAATCTCATATTCTGACGAGCCCACTTCGTCTCGTCCACGTCGTGCCATGAATGATGTTTGGCCTGATCTTTTTCTTGAAGACTTAACCGTCCAAGTCGCCATTGATGCTTCTCACTCTTCTGGTCGTCTTTCTGCAGCTCCTGCGCTTGCCAACTTGTTTCAGGTTTGTTCGAGGTGGCGGGCTGTGTCACGGTCGGATCGCCTGTGGCAGCAGCTCACCGAGAGGATATGGCGGCGCACAGTTCAAGTGCGAGACACGTGGTATGAAGAGTTCATTCACTGGCACCGAATGGCCAGGAATTTCGTCGCCGGCAGATATGCTTACGCCTCCCTGTGGTTTGGCCCGTCGGACATGGATGACGACCACTACAGCACCGTGATCTGCCGCTGCCTCACCCTCTCCGATGAACATCTCGCCTGCGGCTTCACCGACGGCACCGTCCGCCTCTTCCACCTCGATACTCGCGTCCACTTCAGGACATACCGGTCCCACCAAGCCAACCGTTTAGGTCCCTTCGCGAGATCCGTGTCTGGCATCGTGATCGCTGACAACAGGCTCGTCTTCGCCACGCTGGACGGGGACATCTACGTGACACACCTCGACGAGCCAAATGGTCACACCCGTAGGGCCCGCGTCGGTGACGTGGTCAATAGCGGAGTCCTCGTAGAGTTCGCCGGACGTGGCCGTTGGTGGGTAGGACTCTTCGCCGGGCTCCCGGGCCAGGCGTTTCAGATTTGGGACGCAGAAAACGAACAGCTCGTGTTCATCGGGGGATCCTTGACTGACCCGGAAACCGTCATGGGTTGGCACATGCTGACGGAGTTGATCGAACCGGTGGGTCGGCTTCGGGTGACGAACCAAGGCCTGGCAGTGGCATGTACGAGCTCACAGCTCATAGTGTTCGACCTGAACAGCCAGATGTTATTACATGAGCTCTGGTCCACTGTGGGCGGCTTCATTGTAACATCGATGGACGTGAACGATGAGGCGTTCTTTATCGTGGAAAGGAACGGCGACGCTAAGGTGCGCCTGGCGGGCACGTTAGAGCTGCTATGTGAATTCCGGACACGTCCGTTGAGGGGTTTGATGGGATGCAGGAACATGGGGTACGCGCTAACGTGCGCCGGGGGTGTGGTGAGGGTCTGGGACATTGAGCGACGGCGGGGACAGCAGCGTTCGGTGGTGGCAGAGAGGGTGGGGGAGGGGATGGCCATGGTGTGCAGCGAGAGACACGTGGCCATTTCTTGTAATGACAGGTCGATACACCTTTGGGATTTCGGTGTATAA 1389 0.5695 MSSSSSSSSSSSSPHDSPNHNHNAGADPGPSSRTISYSDEPTSSRPRRAMNDVWPDLFLEDLTVQVAIDASHSSGRLSAAPALANLFQVCSRWRAVSRSDRLWQQLTERIWRRTVQVRDTWYEEFIHWHRMARNFVAGRYAYASLWFGPSDMDDDHYSTVICRCLTLSDEHLACGFTDGTVRLFHLDTRVHFRTYRSHQANRLGPFARSVSGIVIADNRLVFATLDGDIYVTHLDEPNGHTRRARVGDVVNSGVLVEFAGRGRWWVGLFAGLPGQAFQIWDAENEQLVFIGGSLTDPETVMGWHMLTELIEPVGRLRVTNQGLAVACTSSQLIVFDLNSQMLLHELWSTVGGFIVTSMDVNDEAFFIVERNGDAKVRLAGTLELLCEFRTRPLRGLMGCRNMGYALTCAGGVVRVWDIERRRGQQRSVVAERVGEGMAMVCSERHVAISCNDRSIHLWDFGV 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3813g00007 462 PANTHER WD40 REPEAT PROTEIN 12, 37 15 421 - -
Pral3813g00007 462 Gene3D - 151 461 IPR015943 GO:0005515
Pral3813g00007 462 SUPERFAMILY F-box domain 82 130 IPR036047 GO:0005515
Pral3813g00007 462 MobiDBLite consensus disorder prediction 1 48 - -
Pral3813g00007 462 MobiDBLite consensus disorder prediction 1 44 - -
Pral3813g00007 462 Gene3D - 75 136 - -
Pral3813g00007 462 SUPERFAMILY WD40 repeat-like 156 459 IPR036322 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3813g00007 Pral-Chr3813 67954 73474 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Pral3813g00007 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3813g00007 - - pcin:129302822 797.349