Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3812g00005 ATGAAGATTGGTGAAGGGAGAGGCAAGGCAATGGAGTCCCGGTGTCAGGAGGCGGACAAGCTGTTTGAGAGTGCTCCGGTGTGTTTTCCGGAGGGCGGCCCCATCCAGTGGGAGAGGACCACGGAGGTGGCCCCCGGCGCCACAAAGGAAATGGTTTACCAACGGCATCAGGACGTCGAGCAGATTGGTTCGGGCCGGGTTCCGCCACCAGATTACCCGGGCTACTCTTGGCCCTCCTCCGCCAAACAGCCACCCAAGTGTAGCGGTCCCATAAGAAAGAAGCGCAGCTCTTGGTCTATGGACGAACACATATTGTTCCTGGTGGGAGTGGAGATACATGGGAAGGGAGAATGGAAGAAAATATCTGAAAACGTAGCGAGGACAAGAAGTGTAATTCAGGTGGCAAGCCATGCCAAAAAGTTCTATATATCTTCGCCAAAGTAA 444 0.5428 MKIGEGRGKAMESRCQEADKLFESAPVCFPEGGPIQWERTTEVAPGATKEMVYQRHQDVEQIGSGRVPPPDYPGYSWPSSAKQPPKCSGPIRKKRSSWSMDEHILFLVGVEIHGKGEWKKISENVARTRSVIQVASHAKKFYISSPK 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3812g00005 147 CDD SANT 97 141 IPR001005 -
Pral3812g00005 147 ProSiteProfiles Myb-like domain profile. 90 142 IPR001005 -
Pral3812g00005 147 MobiDBLite consensus disorder prediction 60 94 - -
Pral3812g00005 147 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 92 146 IPR017930 -
Pral3812g00005 147 Pfam Myb-like DNA-binding domain 95 140 IPR001005 -
Pral3812g00005 147 SUPERFAMILY Homeodomain-like 91 144 IPR009057 -
Pral3812g00005 147 ProSiteProfiles SANT domain profile. 93 146 IPR017884 -
Pral3812g00005 147 SMART sant 94 144 IPR001005 -
Pral3812g00005 147 NCBIfam myb-like DNA-binding domain, SHAQKYF class 93 143 IPR006447 GO:0003677
Pral3812g00005 147 Gene3D - 96 145 - -
Pral3812g00005 147 PANTHER TRANSCRIPTION FACTOR KUA1 16 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3812g00005 Pral-Chr3812 36158 36732 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral3812g00005 Myb_DNA-binding 2.6e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3812g00005 - - lja:Lj2g3v1890900.1 95.9005