Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3810g00042 ATGAATTCGACACAACTGTCACGAGTTCGCAACGCAAGAGTTGGCTTACAGACCATTAGCGTCGGAGATGCTCCGGCAACGGACAGTCCGCGATTAGGTGTGGATGACGAGACGTTGAAGAGTTATCCGGTGCTGTTATACTCAGAAGTGAAGCGTGACCGGAAAGGCGGTGCCGCCCGTGGTGGTGATTTTGCGGCAACTTGTTCGATATGTTTGGGGGATTTCAGTGACAGTGACAGGTTGAGGGAGTTGCCGGATTGTCATCACTTGTTTCATCAGAAGTGCATTGATATGTGGCTGAGGATGAACTCTTCGTGTCCGTTGTGTCGGACCTCACCGCTCCCGACGCCGGTTTCAACTCCGCTGGCCGAAGTTGCTCCCTTGGCAAGATCCTCAGGGGCTTGA 405 0.5333 MNSTQLSRVRNARVGLQTISVGDAPATDSPRLGVDDETLKSYPVLLYSEVKRDRKGGAARGGDFAATCSICLGDFSDSDRLRELPDCHHLFHQKCIDMWLRMNSSCPLCRTSPLPTPVSTPLAEVAPLARSSGA 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3810g00042 134 CDD RING-H2_EL5-like 68 110 - -
Pral3810g00042 134 SUPERFAMILY RING/U-box 43 116 - -
Pral3810g00042 134 ProSiteProfiles Zinc finger RING-type profile. 68 110 IPR001841 -
Pral3810g00042 134 SMART ring_2 68 109 IPR001841 -
Pral3810g00042 134 Pfam Ring finger domain 67 110 IPR001841 -
Pral3810g00042 134 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 31 124 IPR045899 -
Pral3810g00042 134 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 24 114 IPR013083 -
Pral3810g00042 134 FunFam E3 ubiquitin-protein ligase ATL6 23 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3810g00042 Pral-Chr3810 337136 337587 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3810g00042 33 134 C3H Transcription Factor Family AT2G35910 58.824 1.99e-39 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3810g00042 - - pcin:129304115 199.904