Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3810g00041 ATGAACCTCAACAGCGGCGCCGTCGCCTTCACTTTCGGTATTATTTTCCTAGTTCTATCCATCTGTTTTGCCTGCCTCCGCCTTCGCCGGCTCTCCGGCAACCCCACCATGTTCAATTTTCTTGCACGTCCTTCTGCCGCCGCCATACCAGTTGAAGCCGTCGAACCCCCCGCGGTAGCAGAACGTGGTCTCGATGACTCCATTATCAACAGCTTCCCCAAGCTCTCCTACTCTGAGATGAAGAAAAGCTCTTATAATAATCCCAACAATACTGAAGACCCTTCTAATAATTCCTCTTCATGTTCCATCTGCTTAGCAGATTATAAGGAAGAAGACATGTTAAGGTTGCTCCCTGATTGTGGCCATCTTTATCATCTTCGTTGCGTTGACCCATGGCTCAAGTTACACAACACTTGCCCTGTATGTCGAACTCGAACCTTCCCTTCTGTTAAAGCTCACGATGATCGGTCAAATAACTCCGTCGAGGGGGACATATAG 498 0.4839 MNLNSGAVAFTFGIIFLVLSICFACLRLRRLSGNPTMFNFLARPSAAAIPVEAVEPPAVAERGLDDSIINSFPKLSYSEMKKSSYNNPNNTEDPSNNSSSCSICLADYKEEDMLRLLPDCGHLYHLRCVDPWLKLHNTCPVCRTRTFPSVKAHDDRSNNSVEGDI 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3810g00041 165 Pfam Ring finger domain 100 143 IPR001841 -
Pral3810g00041 165 SUPERFAMILY RING/U-box 100 149 - -
Pral3810g00041 165 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 8 152 IPR045899 -
Pral3810g00041 165 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 54 148 IPR013083 -
Pral3810g00041 165 SMART ring_2 101 142 IPR001841 -
Pral3810g00041 165 CDD RING-H2_PA-TM-RING 105 143 - -
Pral3810g00041 165 FunFam E3 ubiquitin-protein ligase ATL6 53 149 - -
Pral3810g00041 165 ProSiteProfiles Zinc finger RING-type profile. 101 143 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3810g00041 Pral-Chr3810 329398 329909 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3810g00041 63 149 C3H Transcription Factor Family AT5G06490 55.172 4.04e-29 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3810g00041 - - pcin:129319166 218.779