Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3810g00028 ATGGGGGTAGAAAACTACCATGTAATTGAGCTCGTCGGTGAAGGTTCATTTGGGAAGGTGTACAAAGGAAGGAGGAAGTATACAGGACAGACCGTTGCAATGAAGTTCATCATGAAGCATGGCAAAAGTGAGAAGGACATCCATAATCTAAGACAAGAAATTGAGATCTTAAGAAAATTGAAGCATGAAAATATTATCCAAATGCTTGATTCCTTTGAAAGCCCGCAAGAGTTTTGTGTTGTCACAGAATTCGCGCAAGGAGAATTATTTGAGATTCTTGAGGATGATAAATGCCTTCCTGAAGAACAAGTTCAAGCAATTGCAAAGCAATTGGTGAAAGCATTATACTACTTGCACTCTAATCGCATCATTCACCGCGACATGAAGCCACAGAATATTCTCATTGGTGCTGGATCTGTTGTCAAGCTTTGTGATTTTGGGTTTGCACGTGCGATGTCGATGAACACTGTTGTTTTGCGATCCATAAAAGGAACTCCATTGTACATGGCTCCAGAACTTGTACGGGAACAACCTTACAATCACACTGTTGATTTGTGGTCTCTTGGTGTTATATTGTATGAGTTGTTTGTTGGCCAACCTCCTTTTTATACAAATTCTGTATATGCTCTCATCAGACATATTGTTAAGGACCCAGTTAAATATCCAGACAGCATGAGCCCCCAGTTCAAAAGCTTTTTGAAAGGTTTACTTAACAAGGCACCAGAAAGTCGACTGACTTGGCCAGCTCTTCTTGAGCATCCATTTGTTAAGGAAACTTCAGATGAATTAGAGACAAAGGAAACGAGTGAGATATCTGTTTCACCGAAGGGCTGTGATCCAACACGGAGGGGTGAAGAAAAAACCTATCAACCTTCAACAGCTTTTGAGGAGAATACTACTTTGCCTTCTCAAAGTGAAGCTCAGAAAAATTGTCCCAACTTGGAGACAGCCCATCCTTCAGTACATAATGCGTCCCCAGGATTTTCAAATCAAAAGAGTGTTAGAGAAACAGGTTGCCAGAGATTGGAGAAACTAGAAAATATCTCTCGTACAGTGAAAGGTGCAAAATTAATTGGTCAGGATAGTGAAGCATTGGCTTATCTTATGCTACGCTTGAAAACATGGTCTGAAGGATCTCCTGACCAATGCAGTGATCAAGACATTGTTGATACAAATCGGTCATTGAGAATTCTCTCAAATCTAGTTGCAGCAGAAGCCCTCAGTTCTAGTGGACGAATAGATGAACTACTAAGTGAGCTTCTAGCATTTAGCGGAGTTATCATGAGAATTAAATCCTCTGAAGCTAACGACATGGTAGAAAAGAGTTTCTCTATCACTAAAATGTTATTAGATAATAATGGAAGCTTCAATGCAAGCTCTTATCTGAGGCATTGGGTTGCGATTGTGGAAATTTATTCACAGGTCGTAGCTTCCATAAATGATGCATCTGGAAAGGTTCTCTATGAGTCCAGTGCATGTATTACAATAATGCTATCTAAAGTTGCTCAGGCTGTTAAATCATCTTCTCAGACTTCAGGTCCCGAGACATTGAATGAGACGATAAAAAAAATTCTGGATCATGCTAAAACATCTGGTGTAGTGGATCTTTTGTGTCTCTGCTTAAAAGCTTCAGGTTCTTCAGGTTCTTCTATTATGTTACGGGCAGCTTCAGAGGCATGTAGAGCTATCTGGTCTCTGATAAATGCATTGGATATTCTTTTCATGAAAACAAATGCCATTGTATTTCCTATAGATGCTTTGCAGAGCCATTCTTTGTCCCGATTAGAAATTATAGATCATGATCAAAGTCCACTTATTGGGTGTGAGTCATCAAAAATTGTTGAAGCAGTAACAAAAGCATTTCTGAATACCAAAGCCATTCGGGTTGCTGTTTACTACTGTTTCCACCAATGCCTTGAGGCTGCAATGTCTTCTGGTCTTCAGCTTTTGTCAAGGTGTTGCCTGCACAGTGGTGTTGTTCCATCACTCCTTTGTGGTCTTCCTAGCTCCCTTCCTGTGGCTACTGTTGTTAGTGGTGGTGGAGATGGTACAATTGTTTCGGAAATATTTTCTGTATTGTCATTATGCACTGCCTCTTTAAATAAAGATCCACAAAGTGGAGATTCAAATAATCTGAGGTGCAAATTCACCAATCCTTCTGCTCTGATTCTTTCTTCATGCCTCATTCTTGCTATAATTGCTCAATGTTTGAAGTCATCTGGAAGAAATTCAGCACTGTTTATGCTCACAAACTCACCGAAGAAACAGCTCGCTCGACTTTCATTGCTCGCCCATCATATTTCTTCTGATGATAGAGAGAAAACTTCTTGTCAACCCCAAAATGCATCAGCCATGCTTGCTTTAGCATCCATTCTATCCCTTGAATCAGGGGCTGCTATTGAGTCCTCGATCTTTGAAATTGCCATGCCTTTGATTCCTCGAACATCTTCACTATATGATTATCTTAAAATTTCATCTGTTAATAAAAATGAATTGGATCCTTCCTACCCTGGTGGGAAGCTCTCATATTGGCAAGGACTAAGGGATGGTTGTGTTGGCCTTTTAGATTCCAGACTGAAGTGGGGAGGACCATTAGCTGTTCAACAGTTGTGTGCTATTGGTGTCCCTCTTTTGCTTATTGGCTTATTAAGCATTGATGGCACCAATGCTTCTCATGGAGCTGAGTGCTCAAATGATACAGTTGGATTATCCCCTACAGGTGTTATATGGACAATTTCATCAATATGTCAATGCCTCTCTGGTGGTGCTTCTACTTTTCGTCAGATATTGATTAGGAATGAACATATCAAGCTCTTTTCTAACTTGATATGTGATGCTCATCTGAAGTTGATAAACAGATGGATTGGACCTGGTGGAGGGAGAGCAGGAGTTAGGGATCTAATTAATGCAATAATAGATCTCTTAGCATTTCCATTTGTTGCTCTACAAAATGTGCCTGGCTTGCCGGCTGCCACAACATCGATCAACAGTGGATTTCTTCTCAACATGGGCTCTCCTTGTCATAAAGTATGCATGGAAGATAAAGCCATAATTAAAGCAATAGAAGATGACATGGGAAAATACATCAAGATCCTTGTTGAGGTTGGAGTTCCTGGTACTATCCTGCGATGCTTACATAATATGGAGTTGAAGGAGTTGGGTAGGCCTGTTGCCTTTCTTGCTAAAATGGTCAGTCATCGCCCTTTGGCATTTCAACTTGTGAGCCAAGGCCTTCTAGATCCAAATCGGATGAGAAGGTTTTTCGATGGTTCAGTCCCAAAAGAGGTCACACTAGATGCCCTCATGATAGTTTCTGATCTTGCTCGTATGGACAAGGCGTTCTATGAGTACATTAAAGGTGCTTCTATCTTGGAGTTCTTAAAAGGTTTTCTTTTGCACGATGACCCCAACATCCGCGCCAAAACTTGCAGTGCTATTGGAAATATGTGTCGTCACAGTGCCTACTTTTATAGTTCACTTGCAAGACATCAGATTGTAAGTATTCTTATTGATCGATGTGCTGATCCAGACAGACGTACAAGAAAATTTGCTTGCTTTGCTATCGGAAACGCAGCCTACCACAATGACATGCTATATGAAGAGCTGAGAAGATCCATTCCTCAATTGGCAAATTTGCTGTTGATGGCAGAAGAGGACAAGACTAAAGCAAATGCGGCAGGCGCACTTAGCAATCTGGTTCGCAACTCTGACAGGCTATGTGAAGATATTGTATCCAAAGGAGCAATTCAGGCCCTCCTGAAGCTAATTTCAGATTGTTCGCTTACAGCATTGAATCCAAGCAGAAATGATTCGATAAGTGAGTCCCCTTTAAAAATAGCTCTCTTTTCCTTGGGAAAAATGTGTGCCCACCAACCCTGCAGACACTTCCTCCGTTCATCACCATTGTTTCCCGTTGTTGGAAGGCTTCAACAATGCCCTGAATCATCAATTGCCAAGTATGCCTCTGTAATTGTCAGCAAAGTTGCTGAAGTTTGA 3996 0.4094 MGVENYHVIELVGEGSFGKVYKGRRKYTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHENIIQMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQAIAKQLVKALYYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSMNTVVLRSIKGTPLYMAPELVREQPYNHTVDLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDSMSPQFKSFLKGLLNKAPESRLTWPALLEHPFVKETSDELETKETSEISVSPKGCDPTRRGEEKTYQPSTAFEENTTLPSQSEAQKNCPNLETAHPSVHNASPGFSNQKSVRETGCQRLEKLENISRTVKGAKLIGQDSEALAYLMLRLKTWSEGSPDQCSDQDIVDTNRSLRILSNLVAAEALSSSGRIDELLSELLAFSGVIMRIKSSEANDMVEKSFSITKMLLDNNGSFNASSYLRHWVAIVEIYSQVVASINDASGKVLYESSACITIMLSKVAQAVKSSSQTSGPETLNETIKKILDHAKTSGVVDLLCLCLKASGSSGSSIMLRAASEACRAIWSLINALDILFMKTNAIVFPIDALQSHSLSRLEIIDHDQSPLIGCESSKIVEAVTKAFLNTKAIRVAVYYCFHQCLEAAMSSGLQLLSRCCLHSGVVPSLLCGLPSSLPVATVVSGGGDGTIVSEIFSVLSLCTASLNKDPQSGDSNNLRCKFTNPSALILSSCLILAIIAQCLKSSGRNSALFMLTNSPKKQLARLSLLAHHISSDDREKTSCQPQNASAMLALASILSLESGAAIESSIFEIAMPLIPRTSSLYDYLKISSVNKNELDPSYPGGKLSYWQGLRDGCVGLLDSRLKWGGPLAVQQLCAIGVPLLLIGLLSIDGTNASHGAECSNDTVGLSPTGVIWTISSICQCLSGGASTFRQILIRNEHIKLFSNLICDAHLKLINRWIGPGGGRAGVRDLINAIIDLLAFPFVALQNVPGLPAATTSINSGFLLNMGSPCHKVCMEDKAIIKAIEDDMGKYIKILVEVGVPGTILRCLHNMELKELGRPVAFLAKMVSHRPLAFQLVSQGLLDPNRMRRFFDGSVPKEVTLDALMIVSDLARMDKAFYEYIKGASILEFLKGFLLHDDPNIRAKTCSAIGNMCRHSAYFYSSLARHQIVSILIDRCADPDRRTRKFACFAIGNAAYHNDMLYEELRRSIPQLANLLLMAEEDKTKANAAGALSNLVRNSDRLCEDIVSKGAIQALLKLISDCSLTALNPSRNDSISESPLKIALFSLGKMCAHQPCRHFLRSSPLFPVVGRLQQCPESSIAKYASVIVSKVAEV 1331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3810g00028 1331 Gene3D Transferase(Phosphotransferase) domain 1 2 318 - -
Pral3810g00028 1331 Gene3D - 1054 1328 IPR011989 -
Pral3810g00028 1331 MobiDBLite consensus disorder prediction 261 307 - -
Pral3810g00028 1331 ProSiteProfiles Protein kinase domain profile. 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3810g00028 1331 SMART serkin_6 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3810g00028 1331 MobiDBLite consensus disorder prediction 291 307 - -
Pral3810g00028 1331 SUPERFAMILY Protein kinase-like (PK-like) 4 321 IPR011009 -
Pral3810g00028 1331 FunFam Serine/threonine-protein kinase TIO 1058 1327 - -
Pral3810g00028 1331 FunFam Serine/threonine-protein kinase 36 3 320 - -
Pral3810g00028 1331 Coils Coil 40 60 - -
Pral3810g00028 1331 PANTHER PROTEIN KINASE RELATED 3 1328 - -
Pral3810g00028 1331 SMART arm_5 1195 1234 IPR000225 GO:0005515
Pral3810g00028 1331 SMART arm_5 1111 1151 IPR000225 GO:0005515
Pral3810g00028 1331 SMART arm_5 1235 1289 IPR000225 GO:0005515
Pral3810g00028 1331 SUPERFAMILY ARM repeat 1007 1328 IPR016024 -
Pral3810g00028 1331 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Pral3810g00028 1331 CDD STKc_STK36 4 256 - -
Pral3810g00028 1331 FunFam Aurora kinase A 1 88 - -
Pral3810g00028 1331 Pfam Protein kinase domain 6 256 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral3810g00028 1331 ProSitePatterns Protein kinases ATP-binding region signature. 12 39 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3810g00028 Pral-Chr3810 170143 184631 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3810g00028 1 245 AGC Kinase Gene Family AT3G08720 38.866 1.73e-46 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK ULK_Fused Pral3810g00028 Pkinase 8.3e-78 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3810g00028 K06228 - gmx:100792102 2028.83