Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3810g00027 ATGCCAGGCATACCTGTTGTGGCGCGTGAGACCTCCTGTTCTAGAAGCAGTGATCAAATGTGCCGCCTAGATTCTCGAGGTCATTTATCTGCAGAAGAGGAGGTTGCTGCTGAAGAGAGTCTTGCAGTTTATTGCAAGCCTGTAGAGTTCTACAACATTCTTCAGCGACGTGCTATAAGCAATCCATCATTTCTCCAAAGGTGTCTGCAGTACAGGATAAAGGCTAGGCACAAGAGGAGAATACAAATGACAATTTCGCTGTCACGGACTGTGACTGAAACCCAGACTGTCTTTCCTTTGTATATCTTTCTGGCAAGATTGGTTTCTGATGTTGGAGCTGCAGAGTATTCTGCTACATATAGCATCAGTCGGCTTTGCATGTTTCGCAACTGCCCTGGCATTGATGGGAGTTCTCAAGTCCAAGCAAACTTTACGCTCCCTGAAGTTAGTAAGCTAGCTGTGGAAGCTAAATCTCGTACACTTGCTATTCTATTCATCAGCTCTGTGGAAAACTTGAATTCATCAATTGGAGGCAGTACGAGCATGGTGCCTTTGGATCTTACTTCTTTTGCATCAAAAGCTGAAGGATACTGCTTATATGGAAAAGTATCTCTAGAATCACTTTATATGACGTGGGAGAGCTCTCCAAATTTTAATTTGGGGCAGCGAGCTGAGATCATGTCAACTGTTGATTTTCTTCCTTGTTTTTTGAAGTCAGATTTTTTAAATGAGGACAAGCGTGTTTCCATTCAAGTTCCCTGTAACTCTGAAAATAGGGTTTCAAAGCAAATTCAAATGATAGTTTCTGCAGAAGAGTTTGGGGCTAAGGAAAAATCTCACTATCATACATATGTGGGCGATGAAGTACCATCTTCATCACTATCTCATATCATGCGGTTGAGGGAAGGAAATGTCATATTTAATTACAGGTATTACCAGAATAAGTTGCAGAGAACAGAAGTCACTGAAGATTTCTCCTGTCCGTTCTGTTTGGTTAAATGTGCCAGCTTTAAGGGTCTAAAATGTCACTTGCCGTCGTCTCATGATCTCTTCAGCTTTGAATTTTGGCAATCAGATGAATTTCTTGCTGTGAATGTCTCTGTGAAAACTGATATCTGGAGATCTGAGATGATTGCCGATGGTGTTGATCCGAAGTTACAAACATTCTTCTTTTGTGCAAAGCCACTTAAGCGTAGAAGACCGAAGTCCTTAGCTTCTAAAAATGAAAAGCGTGTGCATTCACTTCTTGTAGGATCTGACTTCCCTGCAGAAGATGAGCTTTTGGAGAAGGCTGATGGGTTTTTGGGGCATATGCATCCAGACCCATATGTCCAATCAGTATCTGAAAATAATCTTGGGACTCCTGCGGTTCTACAGTTTGCAAAGACAAGAAAGCTATCTGTTGAGCTTTCTGATCCACGAAACTGTGCCCTCCTGAGGAAACGGCAGTTCTTTCACTCTCACAGAGCCCAGCCAATGGCACTTGAACAAGTTCTATCAGATCAAGATAGTGAAGATGAAGTTGATGATGATGTGGCAGATTATGAAGATCGAAGGATGCTTGATAATTTTGTTGATGTGACCAAAGATGAGAAGCAAATCATGCATATGTGGAACTCATTTGTTCGGAAGCAGCGTGTTATTGCTGATGGCCATATTCCATGGGCTTGTGAAGCTTTCTGTAAACTGCATGCCCCTGAACTTGTCGGGTCCACTTCACTAGCTTGGTCTTGGAGATTCTTTATGATCAAACTTTGGAATCATGGTCTTCTAGATGCACGTACCATGAATGAGTGTAATCTAATTCTTGAACGATGTCGGAGGGAGAACTCAGACCCTAATAGGTAA 1848 0.4215 MPGIPVVARETSCSRSSDQMCRLDSRGHLSAEEEVAAEESLAVYCKPVEFYNILQRRAISNPSFLQRCLQYRIKARHKRRIQMTISLSRTVTETQTVFPLYIFLARLVSDVGAAEYSATYSISRLCMFRNCPGIDGSSQVQANFTLPEVSKLAVEAKSRTLAILFISSVENLNSSIGGSTSMVPLDLTSFASKAEGYCLYGKVSLESLYMTWESSPNFNLGQRAEIMSTVDFLPCFLKSDFLNEDKRVSIQVPCNSENRVSKQIQMIVSAEEFGAKEKSHYHTYVGDEVPSSSLSHIMRLREGNVIFNYRYYQNKLQRTEVTEDFSCPFCLVKCASFKGLKCHLPSSHDLFSFEFWQSDEFLAVNVSVKTDIWRSEMIADGVDPKLQTFFFCAKPLKRRRPKSLASKNEKRVHSLLVGSDFPAEDELLEKADGFLGHMHPDPYVQSVSENNLGTPAVLQFAKTRKLSVELSDPRNCALLRKRQFFHSHRAQPMALEQVLSDQDSEDEVDDDVADYEDRRMLDNFVDVTKDEKQIMHMWNSFVRKQRVIADGHIPWACEAFCKLHAPELVGSTSLAWSWRFFMIKLWNHGLLDARTMNECNLILERCRRENSDPNR 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3810g00027 615 PANTHER POLYCOMB GROUP PROTEIN 28 612 - -
Pral3810g00027 615 CDD VEFS-box_EMF2-like 479 605 - -
Pral3810g00027 615 CDD ZnB-Zn_EMF2-like 299 373 - -
Pral3810g00027 615 Pfam VEFS-Box of polycomb protein 466 601 IPR019135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3810g00027 Pral-Chr3810 142042 167343 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3810g00027 1 605 C2H2 Transcription Factor Family AT5G51230 57.656 0.0 660
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3810g00027 - - qsa:O6P43_004854 824.313