Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral3810g00025 ATGCCAGGCATACCTGTTGTGGCGCGTGAGACCTCCTGTTCTAGAAGCAGTGATCAAATGTGCCGCCTAGATTCTCGAGGTCATTTATCTGCAGAAGAGGAGGTTGCTGCTGAAGAGAGTCTTGCAGTTTATTGCAAGCCTGTAGAGTTCTACAACATTCTTCAGCGACGTGCTATAAGCAATCCATCATTTCTCCAAAGGTGTCTGCAGTACAGGATAAAGGCTAGGCACAAGAGGAGAATACAAATGACAATTTCGCTGTCACGGACTGTGACTGAAACCCAGACTGTCTTTCCTTTGTATATCTTTCTGGCAAGATTGGTTTCTGATGTTGGAGCTGCAGAGTATTCTGCTACATATAGCATCAGTCGGCTTTGCATGTTTCGCAACTGCCCTGGCATTGATGGGAGTTCTCAAGTCCAAGCAAACTTTACGCTCCCTGAAGTTAGTAAGCTAGCTGTGGAAGCTAAATCTCGTACACTTGCTATTCTATTCATCAGCTCTGTGGAAAACTTGAATTCATCAATTGGAGGCAGTACGAGCATGGTGCCTTTGGATCTTACTTCTTTTGCATCAAAAGCTGAAGGATACTGCTTATATGGAAAAGTATCTCTAGAATCACTTTATATGACGTGGGAGAGCTCTCCAAATTTTAATTTGGGGCAGCGAGCTGAGATCATGTCAACTGTTGATTTTCTTCCTTGTTTTTTGAAGTCAGATTTTTTAAATGAGGACAAGCGTGTTTCCATTCAAGTTCCCTGTAACTCTGAAAATGTGAGGGTTTCAAAGCAAATTCAAATGATAGTTTCTGCAGAAGAGTTTGGGGCTAAGGAAAAATCTCACTATCATACATATGTGGGCGATGAAGTACCATCTTCATCACTATCTCATATCATGCGGTTGAGGGAAGGAAATGTCATATTTAATTACAGGTATTACCAGAATAAGTTGCAGAGAACAGAAGTCACTGAAGATTTCTCCTGTCCGTTCTGTTTGGTTAAATGTGCCAGCTTTAAGGGTCTAAAATGTCACTTGCCGTCGTCTCATGATCTCTTCAGCTTTGAATTTTGGCAATCAGATGAATTTCTTGCTGTGAATGTCTCTGTGAAAACTGATATCTGGAGATCTGAGATGATTGCCGATGGTGTTGATCCGAAGTTACAAACATTCTTCTTTTGTGCAAAGCCACTTAAGCGTAGAAGACCGAAGTCCTTAGCTTCTAAAAATGAAAAGCGTGTGCATTCACTTCTTGTAGGATCTGACTTCCCTGCAGAAGATGAGCTTTTGGAGAAGGCTGATGGGTTTTTGGGGCATATGCATCCAGACCCATATGTCCAATCAGTATCTGAAAATAATCTTGGGACTCCTGCGGTTCTACAGTTTGCAAAGACAAGAAAGCTATCTGTTGAGCTTTCTGATCCACGAAACTGTGCCCTCCTGAGGAAACGGCAGTTCTTTCACTCTCACAGAGCCCAGCCAATGGCACTTGAACAAGTTCTATCAGATCAAGATAGTGAAGATGAAGTTGATGATGATGTGGCAGATTATGAAGATCGAAGGATGCTTGATAATTTTGTTGATGTGACCAAAGATGAGAAGCAAATCATGCATATGTGGAACTCATTTGTTCGGAAGCAGCGTGTTATTGCTGATGGCCATATTCCATGGGCTTGTGAAGCTTTCTGTAAACTGCATGCCCCTGAACTTGTCGGGTCCACTTCACTAGCTTGGTCTTGGAGATTCTTTATGATCAAACTTTGGAATCATGGTCTTCTAGATGCACGTACCATGAATGAGTGTAATCTAATTCTTGAACGATGTCGGAGGGAGAACTCAGACCCTAATAGGTAA 1851 0.4219 MPGIPVVARETSCSRSSDQMCRLDSRGHLSAEEEVAAEESLAVYCKPVEFYNILQRRAISNPSFLQRCLQYRIKARHKRRIQMTISLSRTVTETQTVFPLYIFLARLVSDVGAAEYSATYSISRLCMFRNCPGIDGSSQVQANFTLPEVSKLAVEAKSRTLAILFISSVENLNSSIGGSTSMVPLDLTSFASKAEGYCLYGKVSLESLYMTWESSPNFNLGQRAEIMSTVDFLPCFLKSDFLNEDKRVSIQVPCNSENVRVSKQIQMIVSAEEFGAKEKSHYHTYVGDEVPSSSLSHIMRLREGNVIFNYRYYQNKLQRTEVTEDFSCPFCLVKCASFKGLKCHLPSSHDLFSFEFWQSDEFLAVNVSVKTDIWRSEMIADGVDPKLQTFFFCAKPLKRRRPKSLASKNEKRVHSLLVGSDFPAEDELLEKADGFLGHMHPDPYVQSVSENNLGTPAVLQFAKTRKLSVELSDPRNCALLRKRQFFHSHRAQPMALEQVLSDQDSEDEVDDDVADYEDRRMLDNFVDVTKDEKQIMHMWNSFVRKQRVIADGHIPWACEAFCKLHAPELVGSTSLAWSWRFFMIKLWNHGLLDARTMNECNLILERCRRENSDPNR 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral3810g00025 616 Pfam VEFS-Box of polycomb protein 467 602 IPR019135 -
Pral3810g00025 616 CDD ZnB-Zn_EMF2-like 300 374 - -
Pral3810g00025 616 CDD VEFS-box_EMF2-like 480 606 - -
Pral3810g00025 616 PANTHER POLYCOMB GROUP PROTEIN 28 613 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral3810g00025 Pral-Chr3810 142042 167344 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral3810g00025 1 606 C2H2 Transcription Factor Family AT5G51230 57.500 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral3810g00025 - - qsa:O6P43_004854 830.476